Association of genetic polymorphisms in PRKDC and XRCC4 with risk of ESCC in a high-incidence region of North China

Tumori. 2016 Mar-Apr;102(2):131-4. doi: 10.5301/tj.5000306. Epub 2015 Jun 29.

Abstract

Background: The nonhomologous end-joining (NHEJ) pathway is the main mechanism repairing DNA double-strand breaks (DSBs) in human cells. This research was designed to study the association between selected variants in NHEJ members and esophageal squamous cell carcinoma (ESCC).

Methods: Two single nucleotide polymorphisms (SNPs), PRKDC (rs7003908) and X-ray repair cross complementing group 4 (XRCC4; rs1805377), were genotyped in a total of 189 patients with ESCC and 189 unrelated control individuals in a high-risk area for ESCC in North China, and the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method was applied.

Results: A significantly different distribution was found in the frequency of PRKDC (rs7003908) genotype between the ESCC group and controls. Individuals homozygous for the C allele had a significant (3.185-fold) increased risk of ESCC. As for XRCC4 (rs1805377) polymorphism, no difference was found in distribution between the ESCC and control groups.

Conclusions: Our results suggest that variation in DNA repair genes may be associated with risk of ESCC.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Asian People / genetics*
  • Asian People / statistics & numerical data*
  • Biomarkers, Tumor / genetics
  • Carcinoma, Squamous Cell / epidemiology*
  • Carcinoma, Squamous Cell / genetics*
  • China / epidemiology
  • DNA End-Joining Repair / genetics*
  • DNA-Activated Protein Kinase / genetics*
  • DNA-Binding Proteins / genetics*
  • Esophageal Neoplasms / epidemiology*
  • Esophageal Neoplasms / genetics*
  • Esophageal Squamous Cell Carcinoma
  • Female
  • Genotype
  • Humans
  • Incidence
  • Male
  • Middle Aged
  • Nuclear Proteins / genetics*
  • Polymerase Chain Reaction
  • Polymorphism, Restriction Fragment Length
  • Polymorphism, Single Nucleotide*

Substances

  • Biomarkers, Tumor
  • DNA-Binding Proteins
  • Nuclear Proteins
  • XRCC4 protein, human
  • DNA-Activated Protein Kinase
  • PRKDC protein, human