doi: 10.1093/bioinformatics/btv433.
Epub 2015 Jul 29.
ClicO FS: an interactive web-based service of Circos
Affiliations
- PMID: 26227146
- PMCID: PMC4817113
- DOI: 10.1093/bioinformatics/btv433
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ClicO FS: an interactive web-based service of Circos
Bioinformatics.
.
Abstract
: We present ClicO Free Service, an online web-service based on Circos, which provides a user-friendly, interactive web-based interface with configurable features to generate Circos circular plots.
Availability and implementation: Online web-service is freely available at http://clicofs.codoncloud.com
Contact: : soonjoo.yap@codongenomics.com
Supplementary information: Supplementary data are available at Bioinformatics online.
© The Author 2015. Published by Oxford University Press.
Figures
ClicO FS Plots. Re-produced circular plots based on publication by Love et al. (2012) (A) Comparative genomics of human and mouse using simulated data show that ClicO FS is capable to generate various data types including tiles, histogram, line plot, heatmap, scatter plot, text, connector, links and highlight plots (B). Circular plots of Escherichia coli O157:H7 genome (C). The tracks from outer to inner rings after the scale (in Mb) represent chromosome, forward genes, reverse genes, tRNA, rRNA, GC plot and GC skew
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