A putative ATPase mediates RNA transcription and capping in a dsRNA virus

Elife. 2015 Aug 4:4:e07901. doi: 10.7554/eLife.07901.

Abstract

mRNA transcription in dsRNA viruses is a highly regulated process but the mechanism of this regulation is not known. Here, by nucleoside triphosphatase (NTPase) assay and comparisons of six high-resolution (2.9-3.1 Å) cryo-electron microscopy structures of cytoplasmic polyhedrosis virus with bound ligands, we show that the large sub-domain of the guanylyltransferase (GTase) domain of the turret protein (TP) also has an ATP-binding site and is likely an ATPase. S-adenosyl-L-methionine (SAM) acts as a signal and binds the methylase-2 domain of TP to induce conformational change of the viral capsid, which in turn activates the putative ATPase. ATP binding/hydrolysis leads to an enlarged capsid for efficient mRNA synthesis, an open GTase domain for His217-mediated guanylyl transfer, and an open methylase-1 domain for SAM binding and methyl transfer. Taken together, our data support a role of the putative ATPase in mediating the activation of mRNA transcription and capping within the confines of the virus.

Keywords: allosteric regulation; biochemistry; biophysics; conformational changes; histidine-mediated guanylyl transfer; structural biology; viral ATPase.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adenosine Triphosphatases / metabolism*
  • Cryoelectron Microscopy
  • RNA, Double-Stranded / metabolism*
  • RNA, Messenger / metabolism*
  • RNA, Viral / metabolism*
  • Reoviridae / enzymology*
  • Reoviridae / genetics*
  • Reoviridae / ultrastructure
  • Transcription, Genetic*
  • Viral Proteins / metabolism

Substances

  • RNA, Double-Stranded
  • RNA, Messenger
  • RNA, Viral
  • Viral Proteins
  • Adenosine Triphosphatases

Associated data

  • PDB/3JAY
  • PDB/3JAZ
  • PDB/3JB0
  • PDB/3JB1
  • PDB/3JB3