Characterization of the effects of C-terminal pro-sequence on self-inactivation of Stereum purpureum endopolygalacturonase I

FEMS Microbiol Lett. 2015 Sep;362(17):fnv134. doi: 10.1093/femsle/fnv134. Epub 2015 Aug 19.

Abstract

Endpolygalacturonase I from Stereum purpureum has been identified as a causative substance for the silver-leaf disease in apples. It possesses a unique pro-sequence in the C-terminal region that lacks endpolygalacturonases from any other origin. In this study, we analyzed and compared enzymatic characteristics between pro-form (pro-endoPG I) and mature form processed by V8 protease (endoPG I) and described the suppression activity of the pro-sequence. Of note, the optimal pH for pro-endoPG I activity shifted to pH 4.0 from pH 4.5-5.0 of endoPG I. The kinetic parameters indicated that the activity inhibition resulted from a pH-independent decrease of substrate affinity and pH-dependent deterioration of velocity by the pro-sequence. Analysis of site-directed mutations within pro-endoPG I showed that its α-helical structure includes two glutamates (E364 and E366) and alanine (A365), and its orientation by prolines (especially P348) in the pro-sequence played a significant role in its suppression activity. As for mutations in the mature domain, a marked reduction of suppression was observed for enzymes with mutations in H150, R220 and K253, indicating that the pro-sequence interacts with the active cleft by a few ionic bonds.

Keywords: Stereum purpureum; endopolygalacturonase; inactivation; kinetics; pectin; pro-sequence; site-direct mutagenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agaricales / enzymology*
  • Agaricales / genetics
  • Amino Acid Sequence
  • Enzyme Precursors / chemistry*
  • Enzyme Precursors / metabolism*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Malus / microbiology
  • Models, Molecular
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Pectins / metabolism
  • Polygalacturonase / chemistry*
  • Polygalacturonase / genetics
  • Polygalacturonase / metabolism*
  • Sequence Homology, Amino Acid
  • Serine Endopeptidases / metabolism

Substances

  • Enzyme Precursors
  • Pectins
  • Polygalacturonase
  • Serine Endopeptidases
  • glutamyl endopeptidase