Crystals of the Arp2/3 complex in two new space groups with structural information about actin-related protein 2 and potential WASP binding sites

Acta Crystallogr F Struct Biol Commun. 2015 Sep;71(Pt 9):1161-8. doi: 10.1107/S2053230X15013515. Epub 2015 Aug 25.

Abstract

Co-crystals of the bovine Arp2/3 complex with the CA motif from N-WASP in two new space groups were analyzed by X-ray diffraction. The crystals in the orthorhombic space group P212121 contained one complex per asymmetric unit, with unit-cell parameters a = 105.48, b = 156.71, c = 177.84 Å, and diffracted to 3.9 Å resolution. The crystals in the tetragonal space group P41 contained two complexes per asymmetric unit, with unit-cell parameters a = b = 149.93, c = 265.91 Å, and diffracted to 5.0 Å resolution. The electron-density maps of both new crystal forms had densities for small segments of subdomains 1 and 2 of Arp2. Both maps had density at the binding site on Arp3 for the C-terminal EWE tripeptide from N-WASP and a binding site proposed for the C motif of N-WASP in the barbed-end groove of Arp2. The map from the tetragonal crystal form had density near the barbed end of Arp3 that may correspond to the C helix of N-WASP. The noise levels and the low resolution of the maps made the assignment of specific molecular structures for any of these CA peptides impossible.

Keywords: Arp2/3; Wiskott–Aldrich syndrome; actin.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Actin-Related Protein 2 / chemistry*
  • Actin-Related Protein 2-3 Complex / chemistry*
  • Amino Acid Motifs
  • Animals
  • Binding Sites
  • Cattle
  • Crystallization
  • Crystallography, X-Ray
  • Static Electricity
  • Wiskott-Aldrich Syndrome Protein / metabolism*

Substances

  • Actin-Related Protein 2
  • Actin-Related Protein 2-3 Complex
  • Wiskott-Aldrich Syndrome Protein

Associated data

  • PDB/4XEI
  • PDB/4XF2