Severe Polycystic Liver Disease Is Not Caused by Large Deletions of the PRKCSH Gene

J Clin Lab Anal. 2016 Sep;30(5):431-6. doi: 10.1002/jcla.21875. Epub 2015 Sep 13.

Abstract

Background: Isolated polycystic liver disease (ADPLD) is an autosomal dominant Mendelian disorder. Heterozygous PRKCSH (where PRKCSH is protein kinase C substrate 80K-H (80 kDa protein, heavy chain; MIM*177060) mutations are the most frequent cause. Routine molecular testing using Sanger sequencing identifies pathogenic variants in the PRKCSH (15%) and SEC63 (where SEC63 is Saccharomyces cerevisiae homolog 63 (MIM*608648); 6%) genes, but about approximately 80% of patients meeting the clinical ADPLD criteria carry no PRKCSH or SEC63 mutation. Cyst tissue often shows somatic deletions with loss of heterozygosity that was recently recognized as a general mechanism in ADPLD. We hypothesized that germline deletions in the PRKCSH gene may be responsible for hepatic cystogenesis in a significant number of mutation-negative ADPLD patients.

Methods: In this study, we designed a multiplex ligation-dependent probe amplification (MLPA) assay to screen for deletions of PRKCSH exons. Genomic DNA from 60 patients with an ADPLD phenotype was included.

Results: MLPA analysis detected no exon deletions in mutation-negative ADPLD patients.

Conclusion: Large copy number variations on germline level are not present in patients with a clinical diagnosis of ADPLD. MLPA analysis of the PRKCSH gene should not be considered as a diagnostic method to explain hepatic cystogenesis.

Keywords: ADPLD; PRKCSH; MLPA; exon deletion; genetic heterogeneity; hepatic cystogenesis.

MeSH terms

  • Adult
  • Aged
  • Calcium-Binding Proteins
  • Cysts / genetics*
  • Female
  • Glucosidases / genetics*
  • Humans
  • Intracellular Signaling Peptides and Proteins / genetics*
  • Liver Diseases / genetics*
  • Male
  • Membrane Proteins / genetics
  • Middle Aged
  • Molecular Chaperones
  • Multiplex Polymerase Chain Reaction / methods
  • RNA-Binding Proteins
  • Retrospective Studies
  • Sequence Deletion / genetics*

Substances

  • Calcium-Binding Proteins
  • Intracellular Signaling Peptides and Proteins
  • Membrane Proteins
  • Molecular Chaperones
  • RNA-Binding Proteins
  • SEC63 protein, human
  • Glucosidases
  • PRKCSH protein, human

Supplementary concepts

  • Polycystic liver disease