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. 2016 Jan 15;32(2):309-11.
doi: 10.1093/bioinformatics/btv557. Epub 2015 Sep 28.

Cytoscape.js: a graph theory library for visualisation and analysis

Max Franz  1 , Christian T Lopes  1 , Gerardo Huck  1 , Yue Dong  1 , Onur Sumer  1 , Gary D Bader  1
Affiliations

Cytoscape.js: a graph theory library for visualisation and analysis

Max Franz et al. Bioinformatics. .

Abstract

Cytoscape.js is an open-source JavaScript-based graph library. Its most common use case is as a visualization software component, so it can be used to render interactive graphs in a web browser. It also can be used in a headless manner, useful for graph operations on a server, such as Node.js.

Availability and implementation: Cytoscape.js is implemented in JavaScript. Documentation, downloads and source code are available at http://js.cytoscape.org.

Contact: gary.bader@utoronto.ca.

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Figures

Fig. 1.
Fig. 1.
A GeneMANIA gene–gene interaction network automatically laid out and visualised with Cytoscape.js, showing interaction strength (edge thickness), interaction type (colour), multiple edges between nodes, protein score (node size) defined using a stylesheet
See this image and copyright information in PMC

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