Distal regulatory element of the STAT1 gene potentially mediates positive feedback control of STAT1 expression

Genes Cells. 2016 Jan;21(1):25-40. doi: 10.1111/gtc.12316. Epub 2015 Nov 23.

Abstract

We previously identified a distal regulatory element located approximately 5.5-kb upstream of the signal transducer and activator of transcription 1 (STAT1) gene, thereafter designating it as 5.5-kb upstream regulatory region (5.5URR). In this study, we investigated the functional roles of 5.5URR in the transcriptional regulation of STAT1 gene. A chromosome conformation capture assay indicated physical interaction of 5.5URR with the STAT1 core promoter. In luciferase reporter assays, 5.5URR-combined STAT1 core promoter exhibited significant increase in reporter activity enhanced by forced STAT1 expression or interferon (IFN) treatment, but STAT1 core promoter alone did not. The 5.5URR contained IFN-stimulated response element and GAS sites, which bound STAT1 complexes in electrophoretic mobility shift assays. Consistently, chromatin immunoprecipitation (ChIP) assays of HEK293 cells with Halo-tagged STAT1 expression indicated the association of Halo-tagged STAT1 with 5.5URR. ChIP assays with IFN treatment demonstrated that IFNs promoted the recruitment of Halo-tagged STAT1 to 5.5URR. Forced STAT1 expression or IFN treatment increased the expression of endogenous STAT1 and other IFN signaling pathway components, such as STAT2, IRF9 and IRF1, besides IFN-responsive genes. Collectively, the results suggest that 5.5URR may provide a regulatory platform for positive feedback control of STAT1 expression possibly to amplify or sustain the intracellular IFN signals.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3T3 Cells
  • Animals
  • Base Sequence
  • Feedback, Physiological*
  • Gene Expression Regulation*
  • Genes, Reporter
  • HEK293 Cells
  • Humans
  • Interferon Regulatory Factor-1 / metabolism
  • Interferons / metabolism
  • Mice
  • Models, Biological
  • Molecular Sequence Data
  • Promoter Regions, Genetic*
  • Protein Binding / genetics
  • STAT1 Transcription Factor / genetics*
  • STAT1 Transcription Factor / metabolism
  • Signal Transduction / genetics
  • Transcription, Genetic
  • Up-Regulation / genetics

Substances

  • Interferon Regulatory Factor-1
  • Irf1 protein, mouse
  • STAT1 Transcription Factor
  • Interferons