No evidence for viral sequences in five lepidic adenocarcinomas (former "BAC") by a high-throughput sequencing approach

BMC Res Notes. 2015 Dec 15:8:782. doi: 10.1186/s13104-015-1669-8.

Abstract

Background: The hypothesis of an infectious etiology of the formerly named bronchiolo-alveolar carcinoma (BAC) has raised controversy. We investigated tumor lung tissues from five patients with former BAC histology using high-throughput sequencing technologies to discover potential viruses present in this type of lung cancer. Around 180 million single reads of 100 bases were generated for each BAC sample.

Results: None of the reads showed a significant similarity for Jaagsiekte sheep retrovirus (JSRV) and no other viruses were found except for endogenous retroviruses.

Conclusions: In conclusion, we have demonstrated the absence of JSRV and other known human viruses in five samples of well-characterized lepidic adenocarcinoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenocarcinoma / genetics*
  • Adenocarcinoma / virology
  • Adenocarcinoma, Bronchiolo-Alveolar / genetics*
  • Adenocarcinoma, Bronchiolo-Alveolar / virology
  • Aged
  • Animals
  • Endogenous Retroviruses / genetics*
  • Endogenous Retroviruses / physiology
  • Female
  • High-Throughput Nucleotide Sequencing / methods*
  • Humans
  • Jaagsiekte sheep retrovirus / genetics*
  • Jaagsiekte sheep retrovirus / physiology
  • Lung / pathology
  • Lung / virology
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / virology
  • Male
  • Middle Aged
  • Pulmonary Adenomatosis, Ovine / genetics
  • Pulmonary Adenomatosis, Ovine / virology
  • Sheep