Epoxide hydrolase-catalyzed enantioselective conversion of trans-stilbene oxide: Insights into the reaction mechanism from steady-state and pre-steady-state enzyme kinetics

Arch Biochem Biophys. 2016 Feb 1:591:66-75. doi: 10.1016/j.abb.2015.12.008. Epub 2015 Dec 20.

Abstract

A detailed kinetic study based on steady-state and pre-steady-state measurements is described for the highly enantioselective epoxide hydrolase Kau2. The enzyme, which is a member of the α/β-hydrolase fold family, preferentially reacts with the (S,S)-enantiomer of trans-stilbene oxide (TSO) with an E value of ∼200. The enzyme follows a classical two-step catalytic mechanism with formation of an alkyl-enzyme intermediate in the first step and hydrolysis of this intermediate in a rate-limiting second step. Tryptophan fluorescence quenching during TSO conversion appears to correlate with alkylation of the enzyme. The steady-state data are consistent with (S,S) and (R,R)-TSO being two competing substrates with marked differences in k(cat) and K(M) values. The high enantiopreference of the epoxide hydrolase is best explained by pronounced differences in the second-order alkylation rate constant (k2/K(S)) and the alkyl-enzyme hydrolysis rate k3 between the (S,S) and (R,R)-enantiomers of TSO. Our data suggest that during conversion of (S,S)-TSO the two active site tyrosines, Tyr(157) and Tyr(259), serve mainly as electrophilic catalysts in the alkylation half-reaction, polarizing the oxirane oxygen of the bound epoxide through hydrogen bond formation, however, without fully donating their hydrogens to the forming alkyl-enzyme intermediate.

Keywords: Catalytic mechanism; Electrophilic catalysis; Enantioselectivity; Epoxide hydrolase; Fluorescence quenching; Tyrosine ionization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Catalysis
  • Enzyme Activation
  • Enzyme Stability
  • Epoxide Hydrolases / chemistry*
  • Epoxide Hydrolases / ultrastructure*
  • Kinetics
  • Models, Chemical*
  • Molecular Docking Simulation*
  • Protein Binding
  • Protein Conformation
  • Stilbenes / chemistry*
  • Substrate Specificity

Substances

  • Stilbenes
  • Epoxide Hydrolases
  • stilbene oxide