Kinetics and mechanistic study of competitive inhibition of thymidine phosphorylase by 5-fluoruracil derivatives

Colloids Surf B Biointerfaces. 2016 Apr 1:140:121-127. doi: 10.1016/j.colsurfb.2015.12.020. Epub 2015 Dec 17.

Abstract

In a previous investigation, cationic liposomes formulated with new 5-FU derivatives, differing for the length of the polyoxyethylenic spacer that links the N(3) position of 5-FU to an alkyl chain of 12 carbon atoms, showed a higher cytotoxicity compared to free 5-FU, the cytotoxic effect being directly related to the length of the spacer. To better understand the correlation of the spacer length with toxicity, we carried out initial rate studies to determine inhibition, equilibrium and kinetic constants (KI, KM, kcat), and get inside inhibition activity of the 5-FU derivatives and their mechanism of action, a crucial information to design structural variations for improving the anticancer activity. The experimental investigation was supported by docking simulations based on the X-ray structure of thymidine phosphorylase (TP) from Escherichia coli complexed with 3'-azido-2'-fluoro-dideoxyuridin. Theoretical and experimental results showed that all the derivatives exert the same inhibition activity of 5-FU either as monomer and when embedded in lipid bilayer.

Keywords: 5-Fluorouracil; Enzymatic inhibition; Liposomes; Polyoxyethylenic spacer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antimetabolites / chemistry
  • Antimetabolites / metabolism
  • Antimetabolites / pharmacology
  • Binding Sites
  • Binding, Competitive
  • Dimyristoylphosphatidylcholine / chemistry
  • Dimyristoylphosphatidylcholine / metabolism
  • Dimyristoylphosphatidylcholine / pharmacology
  • Escherichia coli / enzymology
  • Escherichia coli Proteins / antagonists & inhibitors
  • Escherichia coli Proteins / chemistry
  • Escherichia coli Proteins / metabolism*
  • Fluorouracil / chemistry
  • Fluorouracil / metabolism*
  • Fluorouracil / pharmacology
  • Kinetics
  • Liposomes / chemistry
  • Liposomes / metabolism
  • Liposomes / pharmacology
  • Molecular Docking Simulation
  • Molecular Structure
  • Protein Binding
  • Protein Structure, Tertiary
  • Thymidine / chemistry
  • Thymidine / metabolism*
  • Thymidine Phosphorylase / antagonists & inhibitors
  • Thymidine Phosphorylase / chemistry
  • Thymidine Phosphorylase / metabolism*

Substances

  • Antimetabolites
  • Escherichia coli Proteins
  • Liposomes
  • Thymidine Phosphorylase
  • Fluorouracil
  • Dimyristoylphosphatidylcholine
  • Thymidine