Fusarium oxysporum mediates systems metabolic reprogramming of chickpea roots as revealed by a combination of proteomics and metabolomics

Plant Biotechnol J. 2016 Jul;14(7):1589-603. doi: 10.1111/pbi.12522. Epub 2016 Jan 23.

Abstract

Molecular changes elicited by plants in response to fungal attack and how this affects plant-pathogen interaction, including susceptibility or resistance, remain elusive. We studied the dynamics in root metabolism during compatible and incompatible interactions between chickpea and Fusarium oxysporum f. sp. ciceri (Foc), using quantitative label-free proteomics and NMR-based metabolomics. Results demonstrated differential expression of proteins and metabolites upon Foc inoculations in the resistant plants compared with the susceptible ones. Additionally, expression analysis of candidate genes supported the proteomic and metabolic variations in the chickpea roots upon Foc inoculation. In particular, we found that the resistant plants revealed significant increase in the carbon and nitrogen metabolism; generation of reactive oxygen species (ROS), lignification and phytoalexins. The levels of some of the pathogenesis-related proteins were significantly higher upon Foc inoculation in the resistant plant. Interestingly, results also exhibited the crucial role of altered Yang cycle, which contributed in different methylation reactions and unfolded protein response in the chickpea roots against Foc. Overall, the observed modulations in the metabolic flux as outcome of several orchestrated molecular events are determinant of plant's role in chickpea-Foc interactions.

Keywords: Chickpea; Fusarium oxysporum; NMR; metabolomics; plant-pathogen interaction; proteomics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cicer / genetics
  • Cicer / metabolism
  • Cicer / microbiology*
  • Disease Resistance
  • Fusarium / physiology*
  • Host-Pathogen Interactions / genetics
  • Lignin / metabolism
  • Metabolic Networks and Pathways
  • Metabolomics*
  • Nuclear Magnetic Resonance, Biomolecular
  • Phytoalexins
  • Plant Roots / genetics
  • Plant Roots / metabolism
  • Proteomics*
  • Reactive Oxygen Species / metabolism
  • Sesquiterpenes / metabolism

Substances

  • Reactive Oxygen Species
  • Sesquiterpenes
  • Lignin
  • Phytoalexins