Conformational transformation of ascidiacyclamide analogues induced by incorporating enantiomers of phenylalanine, 1-naphthylalanine or 2-naphthylalanine

J Pept Sci. 2016 Mar;22(3):156-65. doi: 10.1002/psc.2853.

Abstract

We designed five ascidiacyclamide analogues [cyclo(-Xxx(1) -oxazoline(2) -d-Val(3) -thiazole(4) -l-Ile(5) -oxazoline(6) -d-Val(7) -thiazole(8) -)] incorporating l-1-naphthylalanine (l-1Nal), l-2-naphthylalanine (l-2Nal), d-phenylalanine (d-Phe), d-1-naphthylalanine (d-1Nal) or d-2-naphthylalanine (d-2Nal) into the Xxx(1) position of the peptide. The conformations of these analogues were then examined using (1) H NMR, CD spectroscopy, and X-ray diffraction. These analyses suggested that d-enantiomer-incorporated ASCs [(d-Phe), (d-1Nal), and (d-2Nal)ASC] transformed from the folded to the open structure in solution more easily than l-enantiomer-incorporated ASCs [(l-Phe), (l-1Nal), and (l-2Nal)ASC]. Structural comparison of the two analogues containing isomeric naphthyl groups showed that the 1-naphthyl isomer induced a more stable open structure than the 2-naphthyl isomer. In particular, [d-1Nal]ASC showed the most significant transformation from the folded to the open structure in solution, and exhibited the strongest cytotoxicity toward HL-60 cells.

Keywords: 1H NMR; CD spectrum; ROESY; ascidiacyclamide; crystal structure; cytotoxicity; enantiomer; naphthylalanine; phenylalanine; ring-current effect; structural isomer.

MeSH terms

  • Alanine / analogs & derivatives*
  • Alanine / chemistry
  • Cell Survival / drug effects
  • Crystallography, X-Ray
  • Cytotoxins / chemical synthesis*
  • Cytotoxins / pharmacology
  • HL-60 Cells
  • Humans
  • Models, Molecular
  • Naphthalenes / chemistry*
  • Oxazoles / chemistry
  • Peptides, Cyclic / chemical synthesis*
  • Peptides, Cyclic / pharmacology
  • Phenylalanine / chemistry*
  • Protein Conformation
  • Protein Folding
  • Stereoisomerism
  • Structure-Activity Relationship
  • Thiazoles / chemistry

Substances

  • Cytotoxins
  • Naphthalenes
  • Oxazoles
  • Peptides, Cyclic
  • Thiazoles
  • Phenylalanine
  • 1-naphthylalanine
  • ascidiacyclamide
  • Alanine
  • 2-naphthylalanine