Study of Transposable Elements and Their Genomic Impact

Methods Mol Biol. 2016:1400:1-19. doi: 10.1007/978-1-4939-3372-3_1.

Abstract

Transposable elements (TEs) have been considered traditionally as junk DNA, i.e., DNA sequences that despite representing a high proportion of genomes had no evident cellular functions. However, over the last decades, it has become undeniable that not only TE-derived DNA sequences have (and had) a fundamental role during genome evolution, but also TEs have important implications in the origin and evolution of many genomic disorders. This concise review provides a brief overview of the different types of TEs that can be found in genomes, as well as a list of techniques and methods used to study their impact and mobilization. Some of these techniques will be covered in detail in this Method Book.

Keywords: DNA transposon; LINE-1; Retrotransposition; Retrotransposon; SINE; Transposable element; Transposition.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Transposable Elements*
  • Gene Expression Regulation
  • Genome, Human*
  • Genomics* / methods
  • Humans
  • Long Interspersed Nucleotide Elements
  • Retroelements

Substances

  • DNA Transposable Elements
  • Retroelements