Extracting grid cell characteristics from place cell inputs using non-negative principal component analysis

Elife. 2016 Mar 8;5:e10094. doi: 10.7554/eLife.10094.


Many recent models study the downstream projection from grid cells to place cells, while recent data have pointed out the importance of the feedback projection. We thus asked how grid cells are affected by the nature of the input from the place cells. We propose a single-layer neural network with feedforward weights connecting place-like input cells to grid cell outputs. Place-to-grid weights are learned via a generalized Hebbian rule. The architecture of this network highly resembles neural networks used to perform Principal Component Analysis (PCA). Both numerical results and analytic considerations indicate that if the components of the feedforward neural network are non-negative, the output converges to a hexagonal lattice. Without the non-negativity constraint, the output converges to a square lattice. Consistent with experiments, grid spacing ratio between the first two consecutive modules is -1.4. Our results express a possible linkage between place cell to grid cell interactions and PCA.

Keywords: bat; entorhinal; grid cell; hippocampus; human; mouse; navigation; neuroscience; place cell; rat.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computer Simulation
  • Grid Cells / physiology*
  • Hippocampus / physiology*
  • Nerve Net*
  • Place Cells / physiology*
  • Principal Component Analysis
  • Space Perception*

Grant support

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.