The drug-minded protein interaction database (DrumPID) for efficient target analysis and drug development

Database (Oxford). 2016 Apr 7;2016:baw041. doi: 10.1093/database/baw041. Print 2016.

Abstract

The drug-minded protein interaction database (DrumPID) has been designed to provide fast, tailored information on drugs and their protein networks including indications, protein targets and side-targets. Starting queries include compound, target and protein interactions and organism-specific protein families. Furthermore, drug name, chemical structures and their SMILES notation, affected proteins (potential drug targets), organisms as well as diseases can be queried including various combinations and refinement of searches. Drugs and protein interactions are analyzed in detail with reference to protein structures and catalytic domains, related compound structures as well as potential targets in other organisms. DrumPID considers drug functionality, compound similarity, target structure, interactome analysis and organismic range for a compound, useful for drug development, predicting drug side-effects and structure-activity relationships.Database URL:http://drumpid.bioapps.biozentrum.uni-wuerzburg.de.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Database Management Systems
  • Databases, Pharmaceutical*
  • Databases, Protein*
  • Drug Discovery
  • Humans
  • Internet
  • Pharmaceutical Preparations / chemistry*
  • Pharmaceutical Preparations / metabolism
  • Protein Domains
  • Proteins / chemistry*
  • Proteins / metabolism
  • User-Computer Interface

Substances

  • Pharmaceutical Preparations
  • Proteins