Gut microbiota directs PPARγ-driven reprogramming of the liver circadian clock by nutritional challenge

EMBO Rep. 2016 Sep;17(9):1292-303. doi: 10.15252/embr.201642463. Epub 2016 Jul 14.

Abstract

The liver circadian clock is reprogrammed by nutritional challenge through the rewiring of specific transcriptional pathways. As the gut microbiota is tightly connected to host metabolism, whose coordination is governed by the circadian clock, we explored whether gut microbes influence circadian homeostasis and how they distally control the peripheral clock in the liver. Using fecal transplant procedures we reveal that, in response to high-fat diet, the gut microbiota drives PPARγ-mediated activation of newly oscillatory transcriptional programs in the liver. Moreover, antibiotics treatment prevents PPARγ-driven transcription in the liver, underscoring the essential role of gut microbes in clock reprogramming and hepatic circadian homeostasis. Thus, a specific molecular signature characterizes the influence of the gut microbiome in the liver, leading to the transcriptional rewiring of hepatic metabolism.

Keywords: PPARγ; circadian clock; liver; microbiota.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anti-Bacterial Agents / pharmacology
  • Blood Glucose
  • Circadian Clocks* / drug effects
  • Circadian Clocks* / genetics
  • Circadian Rhythm
  • Cluster Analysis
  • Diet, High-Fat*
  • Energy Metabolism / genetics
  • Fecal Microbiota Transplantation
  • Gastrointestinal Microbiome* / drug effects
  • Gene Expression Profiling
  • Humans
  • Liver / metabolism*
  • Male
  • Mice
  • PPAR gamma / metabolism*
  • Signal Transduction

Substances

  • Anti-Bacterial Agents
  • Blood Glucose
  • PPAR gamma