Structural and functional basis of phospholipid oxygenase activity of bacterial lipoxygenase from Pseudomonas aeruginosa

Biochim Biophys Acta. 2016 Nov;1861(11):1681-1692. doi: 10.1016/j.bbalip.2016.08.002. Epub 2016 Aug 5.

Abstract

Pseudomonas aeruginosa expresses a secreted LOX-isoform (PA-LOX, LoxA) capable of oxidizing polyenoic fatty acids to hydroperoxy derivatives. Here we report high-level expression of this enzyme in E. coli and its structural and functional characterization. Recombinant PA-LOX oxygenates polyenoic fatty acids including eicosapentaenoic acid and docosahexaenoic acid to the corresponding (n-6)S-hydroperoxy derivatives. This reaction involves abstraction of the proS-hydrogen from the n-8 bisallylic methylene. PA-LOX lacks major leukotriene synthase activity but converts 5S-HETE and 5S,6R/S-DiHETE to anti-inflammatory and pro-resolving lipoxins. It also exhibits phospholipid oxygenase activity as indicated by the formation of a specific pattern of oxygenation products from different phospholipid subspecies. Multiple mutagenesis studies revealed that PA-LOX does not follow classical concepts explaining the reaction specificity of mammalian LOXs. The crystal structure of PA-LOX was solved with resolutions of up to 1.48Å and its polypeptide chain is folded as single domain. The substrate-binding pocket consists of two fatty acid binding subcavities and lobby. Subcavity-1 contains the catalytic non-heme iron. A phosphatidylethanolamine molecule occupies the substrate-binding pocket and its sn1 fatty acid is located close to the catalytic non-heme iron. His377, His382, His555, Asn559 and the C-terminal Ile685 function as direct iron ligands and a water molecule (hydroxyl) completes the octahedral ligand sphere. Although the biological relevance of PA-LOX is still unknown its functional characteristics (lipoxin synthase activity) implicate this enzyme in a bacterial evasion strategy aimed at downregulating the hosts' immune system.

Keywords: Bacteria; Biomembranes; Eicosanoids; Infection; Inflammation; Protein X-ray crystallography; Protein structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Arachidonic Acid / chemistry
  • Arachidonic Acid / metabolism
  • Catalytic Domain
  • Crystallography, X-Ray
  • Enzyme Activation
  • Enzyme Stability
  • Fatty Acids / metabolism
  • Kinetics
  • Leukotrienes / metabolism
  • Ligands
  • Linoleic Acid / chemistry
  • Linoleic Acid / metabolism
  • Lipoxins / biosynthesis
  • Lipoxygenase / chemistry*
  • Lipoxygenase / metabolism*
  • Models, Molecular
  • Mutant Proteins / metabolism
  • Oxidation-Reduction
  • Pseudomonas aeruginosa / enzymology*
  • Rabbits
  • Recombinant Proteins / metabolism
  • Stereoisomerism
  • Structural Homology, Protein
  • Structure-Activity Relationship
  • Substrate Specificity
  • Temperature

Substances

  • Fatty Acids
  • Leukotrienes
  • Ligands
  • Lipoxins
  • Mutant Proteins
  • Recombinant Proteins
  • Arachidonic Acid
  • Linoleic Acid
  • Lipoxygenase