A molecular epidemiological study of human parainfluenza virus type 3 at a tertiary university hospital during 2013-2015 in Catalonia, Spain

Diagn Microbiol Infect Dis. 2016 Oct;86(2):153-9. doi: 10.1016/j.diagmicrobio.2016.07.023. Epub 2016 Jul 27.

Abstract

Human parainfluenza virus type 3 (HPIV-3) is one of the most common respiratory viruses particularly among young children and immunocompromised patients. The seasonality, prevalence and genetic diversity of HPIV-3 at a Spanish tertiary-hospital from 2013 to 2015 are reported. HPIV-3 infection was laboratory-confirmed in 102 patients (76%, under 5 years of age). Among <5 years-old patients, 9 (11.5%) were under any degree of immunosuppression, whereas this percentage was significantly higher (19; 79.2%) among patients older than 5 years. HPIV-3 was detected at varying levels, but mainly during spring and summer. All characterized HN/F sequences fell within C1b, C5 and in other two closely C3a-related groups. Furthermore, a new genetic lineage (C1c) was described. Genetic similarity and epidemiological data confirmed some nosocomial infections, highlighting the importance of the HPIV-3 surveillance, particularly in high-risk patients. This study provides valuable information on HPIV-3 diversity due to the scarce information in Europe.

Keywords: Children; Fusion protein; HPIV-3; Haemagglutinin-neuraminidase; Human parainfluenza virus type 3; Immunocompromised; Molecular characterization; Phylogenetic analysis.

Publication types

  • Observational Study

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Child
  • Child, Preschool
  • Epidemiologic Studies
  • Female
  • Genetic Variation*
  • Genotype
  • Hospitals, University
  • Humans
  • Infant
  • Infant, Newborn
  • Male
  • Middle Aged
  • Molecular Epidemiology
  • Parainfluenza Virus 3, Human / classification*
  • Parainfluenza Virus 3, Human / genetics*
  • Parainfluenza Virus 3, Human / isolation & purification
  • Polymerase Chain Reaction
  • Prevalence
  • Respirovirus Infections / epidemiology*
  • Seasons
  • Sequence Analysis, DNA
  • Spain / epidemiology
  • Young Adult