Analysis of SCN5A Gene Variants in East Slovak Patients with Cardiomyopathy

J Clin Lab Anal. 2017 Mar;31(2):e22037. doi: 10.1002/jcla.22037. Epub 2016 Aug 24.

Abstract

Objective: Mutations in ion channels genes are potential cause of cardiomyopathy. The SCN5A gene (sodium channel, voltage gated, type V alpha subunit gene; 3p21) belongs to the family of cardiac sodium channel genes. Mutations in SCN5A gene lead to decreased Na+ current and ion unbalance. The SCN5A gene mutations are found in approximately 2% of patients with dilated cardiomyopathy (DCM), and they may be potential phenotype modifiers in hypertrophic cardiomyopathy (HCM). The role of SCN5A gene mutations in cardiomyopathy is not fully elucidated.

Methods: Three selected exons (12, 20, and 21) of the SCN5A gene in the cohort of 58 East Slovak patients with dilated and HCM were analyzed by the Sanger sequencing method in order to detect etiopathogenic mutations associated with dilated and HCM.

Results: The mutation screening of three selected exons of SCN5A gene in the cohort of 27 DCM, 12 HCM patients, and 16 controls identified 10 missense genetic variants. Three of them (T1247I, A1260D, and G1262S), all in exon 21 of the SCN5A gene, were potentially damaging and disease-causing variants.

Conclusion: Data from this study demonstrate that SCN5A gene variants have important role in the etiopathogenesis of dilated and HCM.

Keywords: East Slovak patients; SCN5A gene; cardiomyopathy; potentially damaging variants.

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Amino Acid Substitution / genetics
  • Base Sequence
  • Cardiomyopathy, Dilated / genetics*
  • Cardiomyopathy, Hypertrophic / genetics*
  • Exons / genetics
  • Female
  • Genetic Predisposition to Disease*
  • Humans
  • Male
  • Middle Aged
  • Mutation, Missense / genetics
  • NAV1.5 Voltage-Gated Sodium Channel / genetics*
  • Sequence Analysis, DNA
  • Silent Mutation / genetics
  • Slovakia
  • Sodium / metabolism
  • Young Adult

Substances

  • NAV1.5 Voltage-Gated Sodium Channel
  • SCN5A protein, human
  • Sodium

Associated data

  • GENBANK/rs199473118
  • GENBANK/rs145733679
  • GENBANK/rs397517951
  • GENBANK/rs370684004
  • GENBANK/rs45627438
  • GENBANK/rs749857735
  • GENBANK/rs1805124
  • GENBANK/rs45522138
  • GENBANK/rs780825701
  • GENBANK/rs752243560
  • GENBANK/rs753677814
  • GENBANK/rs764018276
  • GENBANK/rs199540275
  • GENBANK/rs750678689
  • GENBANK/rs137854616