TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants

Elife. 2016 Sep 19;5:e11994. doi: 10.7554/eLife.11994.

Abstract

A major constraint on the evolution of large body sizes in animals is an increased risk of developing cancer. There is no correlation, however, between body size and cancer risk. This lack of correlation is often referred to as 'Peto's Paradox'. Here, we show that the elephant genome encodes 20 copies of the tumor suppressor gene TP53 and that the increase in TP53 copy number occurred coincident with the evolution of large body sizes, the evolution of extreme sensitivity to genotoxic stress, and a hyperactive TP53 signaling pathway in the elephant (Proboscidean) lineage. Furthermore, we show that several of the TP53 retrogenes (TP53RTGs) are transcribed and likely translated. While TP53RTGs do not appear to directly function as transcription factors, they do contribute to the enhanced sensitivity of elephant cells to DNA damage and the induction of apoptosis by regulating activity of the TP53 signaling pathway. These results suggest that an increase in the copy number of TP53 may have played a direct role in the evolution of very large body sizes and the resolution of Peto's paradox in Proboscideans.

Keywords: African elephant; Asian elephant; aardvark; armadillo; cell biology; evolutionary biology; genomics; hyrax.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis
  • Body Size*
  • DNA Repair*
  • Elephants*
  • Evolution, Molecular*
  • Gene Dosage*
  • Gene Expression Profiling
  • Genes, p53*
  • Protein Biosynthesis
  • Signal Transduction
  • Transcription, Genetic

Grant support

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.