Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events

Photochem Photobiol. 2017 Jan;93(1):166-177. doi: 10.1111/php.12647. Epub 2016 Nov 17.

Abstract

Nucleotide excision repair (NER) eliminates a broad variety of helix-distorting DNA lesions that can otherwise cause genomic instability. NER comprises two distinct subpathways: global genomic NER (GG-NER) operating throughout the genome, and transcription-coupled NER (TC-NER) preferentially removing DNA lesions from transcribing DNA strands of transcriptionally active genes. Several NER factors undergo post-translational modifications, including ubiquitination, occurring swiftly and reversibly at DNA lesion sites. Accumulating evidence indicates that ubiquitination not only orchestrates the spatio-temporal recruitment of key protein factors to DNA lesion sites but also the productive assembly of NER pre-incision complex. This review will be restricted to the latest conceptual understanding of ubiquitin-mediated regulation of initial damage sensors of NER, that is DDB, XPC, RNAPII and CSB. We project hypothetical NER models in which ubiquitin-specific segregase, valosin-containing protein (VCP)/p97, plays an essential role in timely extraction of the congregated DNA damage sensors to functionally facilitate the DNA lesion elimination from the genome.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • DNA Damage*
  • DNA Helicases / metabolism
  • DNA Repair Enzymes / metabolism
  • DNA Repair*
  • DNA-Binding Proteins / metabolism
  • Genomic Instability
  • Humans
  • Models, Theoretical
  • Poly-ADP-Ribose Binding Proteins / metabolism
  • Protein Processing, Post-Translational
  • RNA Polymerase II / metabolism
  • Transcription, Genetic
  • Ubiquitin / metabolism
  • Ubiquitination
  • Valosin Containing Protein / metabolism

Substances

  • DDB2 protein, human
  • DNA-Binding Proteins
  • Poly-ADP-Ribose Binding Proteins
  • Ubiquitin
  • XPC protein, human
  • RNA Polymerase II
  • DNA Helicases
  • ERCC6 protein, human
  • Valosin Containing Protein
  • DNA Repair Enzymes