Spike pattern recognition by supervised classification in low dimensional embedding space

Brain Inform. 2016 Jun;3(2):73-83. doi: 10.1007/s40708-016-0044-4. Epub 2016 Mar 16.

Abstract

Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing long EEG recordings. This paper presents a machine learning approach for automated detection of epileptiform discharges (spikes). The proposed method first detects spike patterns by calculating similarity to a coarse shape model of a spike waveform and then refines the results by identifying subtle differences between actual spikes and false detections. Pattern classification is performed using support vector machines in a low dimensional space on which the original waveforms are embedded by locality preserving projections. The automatic detection results are compared to experts' manual annotations (101 spikes) on a whole-night sleep EEG recording. The high sensitivity (97 %) and the low false positive rate (0.1 min-1), calculated by intra-patient cross-validation, highlight the potential of the method for automated interictal EEG assessment.

Keywords: Dimensionality reduction; Epilepsy; Manifold learning; Pattern recognition; Spike detection.