Genus- and Species-Specific PCR Detection Methods

Methods Mol Biol. 2017:1508:267-279. doi: 10.1007/978-1-4939-6515-1_15.

Abstract

PCR-based detection of fungal pathogens offers a sensitive and specific tool for the diagnosis of invasive fungal infections. A large variety of different clinical specimen types can be used as original material. However, certain precautions, in addition to the published MIQE guidelines [1], need to be taken to prevent contaminations from airborne fungal spores and PCR reagents. In addition, the European Aspergillus PCR Initiative (EAPCRI) recently defined standards for Aspergillus PCR [2, 3], following these recommendations leads to superior sensitivity. The combination of fungal PCR with the galactomannan ELISA assay increases the sensitivity for the detection of Aspergillus DNA from blood, compared to a single assay only [4, 5].

Keywords: Amplification; Broad-range PCR; DNA; Detection; Fungi; PCR; Species-specific method.

MeSH terms

  • DNA, Fungal / genetics
  • DNA, Fungal / isolation & purification*
  • Humans
  • Molecular Diagnostic Techniques*
  • Mycoses / diagnosis*
  • Mycoses / microbiology
  • Polymerase Chain Reaction*
  • Sensitivity and Specificity
  • Species Specificity

Substances

  • DNA, Fungal