MEG3 Long Noncoding RNA Contributes to the Epigenetic Regulation of Epithelial-Mesenchymal Transition in Lung Cancer Cell Lines

J Biol Chem. 2017 Jan 6;292(1):82-99. doi: 10.1074/jbc.M116.750950. Epub 2016 Nov 16.

Abstract

Histone methylation is implicated in a number of biological and pathological processes, including cancer development. In this study, we investigated the molecular mechanism for the recruitment of Polycomb repressive complex-2 (PRC2) and its accessory component, JARID2, to chromatin, which regulates methylation of lysine 27 of histone H3 (H3K27), during epithelial-mesenchymal transition (EMT) of cancer cells. The expression of MEG3 long noncoding RNA (lncRNA), which could interact with JARID2, was clearly increased during transforming growth factor-β (TGF-β)-induced EMT of human lung cancer cell lines. Knockdown of MEG3 inhibited TGF-β-mediated changes in cell morphology and cell motility characteristic of EMT and counteracted TGF-β-dependent changes in the expression of EMT-related genes such as CDH1, ZEB family, and the microRNA-200 family. Overexpression of MEG3 influenced the expression of these genes and enhanced the effects of TGF-β in their expressions. Chromatin immunoprecipitation (ChIP) revealed that MEG3 regulated the recruitment of JARID2 and EZH2 and histone H3 methylation on the regulatory regions of CDH1 and microRNA-200 family genes for transcriptional repression. RNA immunoprecipitation and chromatin isolation by RNA purification assays indicated that MEG3 could associate with JARID2 and the regulatory regions of target genes to recruit the complex. This study demonstrated a crucial role of MEG3 lncRNA in the epigenetic regulation of the EMT process in lung cancer cells.

Keywords: cancer biology; epithelial-mesenchymal transition (EMT); histone methylation; long noncoding RNA (long ncRNA, lncRNA); transcription regulation.

MeSH terms

  • Antigens, CD
  • Apoptosis
  • Blotting, Western
  • Cadherins / genetics
  • Cadherins / metabolism
  • Cell Proliferation
  • Chromatin / genetics
  • Epigenesis, Genetic / genetics*
  • Epithelial-Mesenchymal Transition*
  • Fluorescent Antibody Technique
  • Gene Expression Regulation, Neoplastic*
  • Histones / genetics
  • Humans
  • Immunoprecipitation
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / metabolism
  • Lung Neoplasms / pathology
  • MicroRNAs / genetics*
  • Polycomb Repressive Complex 2 / genetics
  • Polycomb Repressive Complex 2 / metabolism
  • RNA, Long Noncoding / genetics*
  • RNA, Messenger / genetics
  • Real-Time Polymerase Chain Reaction
  • Reverse Transcriptase Polymerase Chain Reaction
  • Transforming Growth Factor beta / genetics
  • Transforming Growth Factor beta / metabolism
  • Tumor Cells, Cultured

Substances

  • Antigens, CD
  • CDH1 protein, human
  • Cadherins
  • Chromatin
  • Histones
  • MEG3 non-coding RNA, human
  • MicroRNAs
  • RNA, Long Noncoding
  • RNA, Messenger
  • Transforming Growth Factor beta
  • Polycomb Repressive Complex 2