Setaria: A Food Crop and Translational Research Model for C4 Grasses

doi:10.3389/fpls.2016.01885

. 2016 Dec 15:7:1885.

doi: 10.3389/fpls.2016.01885. eCollection 2016.

Setaria: A Food Crop and Translational Research Model for C₄ Grasses

Shankar R Pant¹, Sonia Irigoyen¹, Andrew N Doust², Karen Beth G Scholthof³, Kranthi K Mandadi⁴

Affiliations

¹ Texas A&M AgriLife Research and Extension Center, Texas A&M University System Weslaco, TX, USA.
² Department of Plant Biology, Ecology, and Evolution, Oklahoma State University Stillwater, OK, USA.
³ Department of Plant Pathology and Microbiology, Texas A&M University College Station, TX, USA.
⁴ Texas A&M AgriLife Research and Extension Center, Texas A&M University SystemWeslaco, TX, USA; Department of Plant Pathology and Microbiology, Texas A&M UniversityCollege Station, TX, USA.

PMID: 28018413
PMCID: PMC5156725
DOI: 10.3389/fpls.2016.01885

Setaria: A Food Crop and Translational Research Model for C₄ Grasses

Shankar R Pant et al. Front Plant Sci. 2016.

. 2016 Dec 15:7:1885.

doi: 10.3389/fpls.2016.01885. eCollection 2016.

Authors

Shankar R Pant¹, Sonia Irigoyen¹, Andrew N Doust², Karen Beth G Scholthof³, Kranthi K Mandadi⁴

Affiliations

¹ Texas A&M AgriLife Research and Extension Center, Texas A&M University System Weslaco, TX, USA.
² Department of Plant Biology, Ecology, and Evolution, Oklahoma State University Stillwater, OK, USA.
³ Department of Plant Pathology and Microbiology, Texas A&M University College Station, TX, USA.
⁴ Texas A&M AgriLife Research and Extension Center, Texas A&M University SystemWeslaco, TX, USA; Department of Plant Pathology and Microbiology, Texas A&M UniversityCollege Station, TX, USA.

PMID: 28018413
PMCID: PMC5156725
DOI: 10.3389/fpls.2016.01885

No abstract available

Keywords: C4 grasses; Setaria; biotic and abiotic stress; foxtail millet; genomics; green foxtail; model systems; nutrition.

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Figures

**Figure 1**
**(A)** *Setaria italica* and **(B)** *S. viridis* are emerging model species for millet and C₄ grass biology. Photo credits: John Hodge and Jesse D. Pyle.

See this image and copyright information in PMC

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References

1. Amadou I., Le G. W., Amza T., Sun J., Shi Y. H. (2013). Purification and characterization of foxtail millet-derived peptides with antioxidant and antimicrobial activities. Food Res. Int. 51, 422–428. 10.1016/j.foodres.2012.12.045 - DOI
1. Ardie S. W., Khumaida N., Nur A., Fauziah N. (2015). Early identification of salt tolerant foxtail millet (Setaria italica L. Beauv). Procedia Food Sci. 3, 303–312. 10.1016/j.profoo.2015.01.033 - DOI
1. Barton L., Newsome S. D., Chen F. H., Wang H., Guilderson T. P., Bettinger R. L. (2009). Agricultural origins and the isotopic identity of domestication in northern China. Proc. Natl. Acad. Sci. U.S.A. 106, 5523–5528. 10.1073/pnas.0809960106 - DOI - PMC - PubMed
1. Bennetzen J. L., Schmutz J., Wang H., Percifield R., Hawkins J., Pontaroli A. C., et al. . (2012). Reference genome sequence of the model plant Setaria. Nat. Biotechnol. 30, 555–561. 10.1038/nbt.2196 - DOI - PubMed
1. Bennetzen J., Park M., Wang H., Zhou H. (2016). LTR retrotransposon dynamics and specificity in Setaria italica, in Genetics and Genomics of Setaria, eds Doust A., Diao X.(Cham: Springer International Publishing; ). Available online at: http://www.springer.com/us/book/9783319451039#aboutBook

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[1] Amadou I., Le G. W., Amza T., Sun J., Shi Y. H. (2013). Purification and characterization of foxtail millet-derived peptides with antioxidant and antimicrobial activities. Food Res. Int. 51, 422–428. 10.1016/j.foodres.2012.12.045 - DOI

[2] Amadou I., Le G. W., Amza T., Sun J., Shi Y. H. (2013). Purification and characterization of foxtail millet-derived peptides with antioxidant and antimicrobial activities. Food Res. Int. 51, 422–428. 10.1016/j.foodres.2012.12.045 - DOI

[3] Ardie S. W., Khumaida N., Nur A., Fauziah N. (2015). Early identification of salt tolerant foxtail millet (Setaria italica L. Beauv). Procedia Food Sci. 3, 303–312. 10.1016/j.profoo.2015.01.033 - DOI

[4] Ardie S. W., Khumaida N., Nur A., Fauziah N. (2015). Early identification of salt tolerant foxtail millet (Setaria italica L. Beauv). Procedia Food Sci. 3, 303–312. 10.1016/j.profoo.2015.01.033 - DOI

[5] Barton L., Newsome S. D., Chen F. H., Wang H., Guilderson T. P., Bettinger R. L. (2009). Agricultural origins and the isotopic identity of domestication in northern China. Proc. Natl. Acad. Sci. U.S.A. 106, 5523–5528. 10.1073/pnas.0809960106 - DOI - PMC - PubMed

[6] Barton L., Newsome S. D., Chen F. H., Wang H., Guilderson T. P., Bettinger R. L. (2009). Agricultural origins and the isotopic identity of domestication in northern China. Proc. Natl. Acad. Sci. U.S.A. 106, 5523–5528. 10.1073/pnas.0809960106 - DOI - PMC - PubMed

[7] Bennetzen J. L., Schmutz J., Wang H., Percifield R., Hawkins J., Pontaroli A. C., et al. . (2012). Reference genome sequence of the model plant Setaria. Nat. Biotechnol. 30, 555–561. 10.1038/nbt.2196 - DOI - PubMed

[8] Bennetzen J. L., Schmutz J., Wang H., Percifield R., Hawkins J., Pontaroli A. C., et al. . (2012). Reference genome sequence of the model plant Setaria. Nat. Biotechnol. 30, 555–561. 10.1038/nbt.2196 - DOI - PubMed

[9] Bennetzen J., Park M., Wang H., Zhou H. (2016). LTR retrotransposon dynamics and specificity in Setaria italica, in Genetics and Genomics of Setaria, eds Doust A., Diao X.(Cham: Springer International Publishing; ). Available online at: http://www.springer.com/us/book/9783319451039#aboutBook

[10] Bennetzen J., Park M., Wang H., Zhou H. (2016). LTR retrotransposon dynamics and specificity in Setaria italica, in Genetics and Genomics of Setaria, eds Doust A., Diao X.(Cham: Springer International Publishing; ). Available online at: http://www.springer.com/us/book/9783319451039#aboutBook

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Setaria: A Food Crop and Translational Research Model for C₄ Grasses

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Setaria: A Food Crop and Translational Research Model for C₄ Grasses

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