ITPR3 gene haplotype is associated with cervical squamous cell carcinoma risk in Taiwanese women

Oncotarget. 2017 Feb 7;8(6):10085-10090. doi: 10.18632/oncotarget.14341.

Abstract

Host immunogenetic background plays an important role in human papillomavirus (HPV) infection and cervical cancer development. Inositol 1,4,5-triphosphate receptor type 3 (ITPR3) is essential for both immune activation and cancer pathogenesis. We aim to investigate if ITPR3 genetic polymorphisms are associated with the risk of cervical cancer in Taiwanese women. ITPR3 rs3748079 A/G and rs2229634 C/T polymorphisms were genotyped in a hospital-based study of 462 women with cervical squamous cell carcinoma (CSCC) and 921 age-matched healthy control women. The presence and genotypes of HPV in CSCC was determined. No significant association of individual ITPR3 variants were found among controls, CSCC, and HPV-16 positive CSCC. However, we found a significant association of haplotype AT between CSCC and controls (OR = 2.28, 95% CI 1.31-3.97, P = 2.83 × 10-3) and the OR increased further in CSCC patients infected with HPV-16 (OR = 2.89, 95% CI 1.55-5.37, P = 4.54 × 10-4). The linkage disequilibrium analysis demonstrated that ITPR3 association with CSCC was independent of HLA-DRB1 alleles. In conclusion, these findings suggest that AT haplotype in the ITPR3 gene may serve as a potential marker for genetic susceptibility to CSCC.

Keywords: HPV; ITPR3; cervical cancer; immunity; polymorphism.

MeSH terms

  • Adult
  • Aged
  • Asian People / genetics
  • Biomarkers, Tumor / genetics*
  • Carcinoma, Squamous Cell / diagnosis
  • Carcinoma, Squamous Cell / ethnology
  • Carcinoma, Squamous Cell / genetics*
  • Carcinoma, Squamous Cell / virology
  • Case-Control Studies
  • Chi-Square Distribution
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • HLA-DRB1 Chains / genetics
  • Haplotypes*
  • Heterozygote
  • Homozygote
  • Human papillomavirus 16 / pathogenicity
  • Humans
  • Inositol 1,4,5-Trisphosphate Receptors / genetics*
  • Linkage Disequilibrium
  • Middle Aged
  • Odds Ratio
  • Papillomavirus Infections / virology
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Risk Assessment
  • Risk Factors
  • Taiwan
  • Uterine Cervical Neoplasms / diagnosis
  • Uterine Cervical Neoplasms / ethnology
  • Uterine Cervical Neoplasms / genetics*
  • Uterine Cervical Neoplasms / virology

Substances

  • Biomarkers, Tumor
  • HLA-DRB1 Chains
  • ITPR3 protein, human
  • Inositol 1,4,5-Trisphosphate Receptors