Tetrahedral DNA Nanoparticle Vector for Intracellular Delivery of Targeted Peptide Nucleic Acid Antisense Agents to Restore Antibiotic Sensitivity in Cefotaxime-Resistant Escherichia coli

Nucleic Acid Ther. 2017 Jun;27(3):176-181. doi: 10.1089/nat.2016.0644. Epub 2017 Jan 12.

Abstract

The bacterial cell wall presents a barrier to the uptake of unmodified synthetic antisense oligonucleotides, such as peptide nucleic acids, and so is one of the greatest obstacles to the development of their use as therapeutic anti-bacterial agents. Cell-penetrating peptides have been covalently attached to antisense agents, to facilitate penetration of the bacterial cell wall and deliver their cargo into the cytoplasm. Although they are an effective vector for antisense oligonucleotides, they are not specific for bacterial cells and can exhibit growth inhibitory properties at higher doses. Using a bacterial cell growth assay in the presence of cefotaxime (CTX 16 mg/L), we have developed and evaluated a self-assembling non-toxic DNA tetrahedron nanoparticle vector incorporating a targeted anti-blaCTX-M-group 1 antisense peptide nucleic acid (PNA4) in its structure for penetration of the bacterial cell wall. A dose-dependent CTX potentiating effect was observed when PNA4 (0-40 μM) was incorporated into the structure of a DNA tetrahedron vector. The minimum inhibitory concentration (to CTX) of an Escherichia coli field isolate harboring a plasmid carrying blaCTX-M-3 was reduced from 35 to 16 mg/L in the presence of PNA4 carried by the DNA tetrahedron vector (40 μM), contrasting with no reduction in MIC in the presence of PNA4 alone. No growth inhibitory effects of the DNA tetrahedron vector alone were observed.

Keywords: CTX-M; DNA nanoparticle vector; E. coli; PNA; restore antibiotic susceptibility.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Cefotaxime / pharmacology
  • Cell Wall / chemistry
  • Cell-Penetrating Peptides / pharmacology*
  • DNA, Single-Stranded / chemistry
  • DNA, Single-Stranded / pharmacology*
  • Dose-Response Relationship, Drug
  • Drug Delivery Systems / trends
  • Escherichia coli / drug effects*
  • Escherichia coli Proteins / drug effects*
  • Microbial Sensitivity Tests
  • Nanoparticles / chemistry
  • Oligonucleotides, Antisense / chemistry
  • Oligonucleotides, Antisense / pharmacology*
  • Peptide Nucleic Acids / chemistry
  • Peptide Nucleic Acids / pharmacology*
  • Plasmids / chemistry
  • beta-Lactamases / drug effects*

Substances

  • Anti-Bacterial Agents
  • Cell-Penetrating Peptides
  • DNA, Single-Stranded
  • Escherichia coli Proteins
  • Oligonucleotides, Antisense
  • Peptide Nucleic Acids
  • beta-Lactamases
  • beta-lactamase CTX-M, E coli
  • Cefotaxime