A thermostable d-polymerase for mirror-image PCR

Nucleic Acids Res. 2017 Apr 20;45(7):3997-4005. doi: 10.1093/nar/gkx079.

Abstract

Biological evolution resulted in a homochiral world in which nucleic acids consist exclusively of d-nucleotides and proteins made by ribosomal translation of l-amino acids. From the perspective of synthetic biology, however, particularly anabolic enzymes that could build the mirror-image counterparts of biological macromolecules such as l-DNA or l-RNA are lacking. Based on a convergent synthesis strategy, we have chemically produced and characterized a thermostable mirror-image polymerase that efficiently replicates and amplifies mirror-image (l)-DNA. This artificial enzyme, dubbed d-Dpo4-3C, is a mutant of Sulfolobus solfataricus DNA polymerase IV consisting of 352 d-amino acids. d-Dpo4-3C was reliably deployed in classical polymerase chain reactions (PCR) and it was used to assemble a first mirror-image gene coding for the protein Sso7d. We believe that this d-polymerase provides a valuable tool to further investigate the mysteries of biological (homo)chirality and to pave the way for potential novel life forms running on a mirror-image genome.

MeSH terms

  • Archaeal Proteins / genetics
  • DNA / biosynthesis*
  • DNA / chemistry
  • DNA Polymerase beta / chemical synthesis
  • DNA Polymerase beta / genetics*
  • DNA Polymerase beta / metabolism
  • DNA-Binding Proteins / genetics
  • Enzyme Stability
  • Mutation
  • Stereoisomerism
  • Sulfolobus solfataricus / enzymology
  • Temperature

Substances

  • Archaeal Proteins
  • DNA-Binding Proteins
  • Sso7d protein, Sulfolobus
  • DNA
  • DNA Polymerase beta