Microsatellite polymorphisms associated with human behavioural and psychological phenotypes including a gene-environment interaction

BMC Med Genet. 2017 Feb 3;18(1):12. doi: 10.1186/s12881-017-0374-y.

Abstract

Background: The genetic and environmental influences on human personality and behaviour are a complex matter of ongoing debate. Accumulating evidence indicates that short tandem repeats (STRs) in regulatory regions are good candidates to explain heritability not accessed by genome-wide association studies.

Methods: We tested for associations between the genotypes of four selected repeats and 18 traits relating to personality, behaviour, cognitive ability and mental health in a well-studied longitudinal birth cohort (n = 458-589) using one way analysis of variance. The repeats were a highly conserved poly-AC microsatellite in the upstream promoter region of the T-box brain 1 (TBR1) gene and three previously studied STRs in the activating enhancer-binding protein 2-beta (AP2-β) and androgen receptor (AR) genes. Where significance was found we used multiple regression to assess the influence of confounding factors.

Results: Carriers of the shorter, most common, allele of the AR gene's GGN microsatellite polymorphism had fewer anxiety-related symptoms, which was consistent with previous studies, but in our study this was not significant following Bonferroni correction. No associations with two repeats in the AP2-β gene withstood this correction. A novel finding was that carriers of the minor allele of the TBR1 AC microsatellite were at higher risk of conduct problems in childhood at age 7-9 (p = 0.0007, which did pass Bonferroni correction). Including maternal smoking during pregnancy (MSDP) in models controlling for potentially confounding influences showed that an interaction between TBR1 genotype and MSDP was a significant predictor of conduct problems in childhood and adolescence (p < 0.001), and of self-reported criminal behaviour up to age 25 years (p ≤ 0.02). This interaction remained significant after controlling for possible confounders including maternal age at birth, socio-economic status and education, and offspring birth weight.

Conclusions: The potential functional importance of the TBR1 gene's promoter microsatellite deserves further investigation. Our results suggest that it participates in a gene-environment interaction with MDSP and antisocial behaviour. However, previous evidence that mothers who smoke during pregnancy carry genes for antisocial behaviour suggests that epistasis may influence the interaction.

Keywords: AP2-β; Androgen receptor; Antisocial; Behaviour; Gene-environment interaction; Microsatellite; Pregnancy; STR; Smoking; TBR1.

MeSH terms

  • Adolescent
  • Adult
  • Alleles
  • Behavior*
  • Child
  • Cognition*
  • Criminal Behavior
  • Female
  • Gene-Environment Interaction
  • Genotype
  • Humans
  • Linkage Disequilibrium
  • Longitudinal Studies
  • Male
  • Microsatellite Repeats / genetics*
  • Phenotype
  • Polymorphism, Single Nucleotide
  • Pregnancy
  • Promoter Regions, Genetic
  • Receptors, Androgen / genetics
  • Smoking
  • T-Box Domain Proteins / genetics
  • Transcription Factor AP-2 / genetics
  • Young Adult

Substances

  • Receptors, Androgen
  • T-Box Domain Proteins
  • TBR1 protein, human
  • TFAP2B protein, human
  • Transcription Factor AP-2