Complete Genome Sequence of Lactobacillus fermentum MTCC 25067 (Formerly TDS030603), a Viscous Exopolysaccharide-Producing Strain Isolated from Indian Fermented Milk

doi:10.1128/genomeA.00091-17

. 2017 Mar 30;5(13):e00091-17.

doi: 10.1128/genomeA.00091-17.

Complete Genome Sequence of Lactobacillus fermentum MTCC 25067 (Formerly TDS030603), a Viscous Exopolysaccharide-Producing Strain Isolated from Indian Fermented Milk

Ni Putu Desy Aryantini¹, Jashbhai B Prajapati², Tadasu Urashima¹, Kenji Fukuda³

Affiliations

¹ Department of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido, Japan.
² Department of Dairy Microbiology, SMC College of Dairy Science, Anand Agricultural University, Anand, Gujarat, India.
³ Department of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido, Japan fuku@obihiro.ac.jp.

PMID: 28360165
PMCID: PMC5374239
DOI: 10.1128/genomeA.00091-17

Complete Genome Sequence of Lactobacillus fermentum MTCC 25067 (Formerly TDS030603), a Viscous Exopolysaccharide-Producing Strain Isolated from Indian Fermented Milk

Ni Putu Desy Aryantini et al. Genome Announc. 2017.

. 2017 Mar 30;5(13):e00091-17.

doi: 10.1128/genomeA.00091-17.

Authors

Ni Putu Desy Aryantini¹, Jashbhai B Prajapati², Tadasu Urashima¹, Kenji Fukuda³

Affiliations

¹ Department of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido, Japan.
² Department of Dairy Microbiology, SMC College of Dairy Science, Anand Agricultural University, Anand, Gujarat, India.
³ Department of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido, Japan fuku@obihiro.ac.jp.

PMID: 28360165
PMCID: PMC5374239
DOI: 10.1128/genomeA.00091-17

Abstract

Lactobacillus fermentum MTCC 25067 (formerly TDS030603) is capable of producing a highly viscous slime exopolysaccharide. We report here the complete genome sequence of the strain, which was deciphered by using PacBio single-molecule real-time sequencing technology.

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References

1. Ruas-Madiedo P, de los Reyes-Gavilán CG. 2005. Invited review: methods for the screening, isolation, and characterization of exopolysaccharides produced by lactic acid bacteria. J Dairy Sci 88:843–856. doi:10.3168/jds.S0022-0302(05)72750-8. - DOI - PubMed
1. Leo F, Hashida S, Kumagai D, Uchida K, Motoshima H, Arai I, Asakuma S, Fukuda K, Urashima T. 2007. Studies on a neutral exopolysaccharide of Lactobacillus fermentum TDS030603. J Appl Glycosci 54:223–229. doi:10.5458/jag.54.223. - DOI
1. Gerwig GJ, Dobruchowska JM, Shi T, Urashima T, Fukuda K, Kamerling JP. 2013. Structure determination of the exopolysaccharide of Lactobacillus fermentum TDS030603-a revision. Carbohydr Res 378:84–90. doi:10.1016/j.carres.2013.04.026. - DOI - PubMed
1. Fukuda K, Shi T, Nagami K, Leo F, Nakamura T, Yasuda K, Senda A, Motoshima H, Urashima T. 2010. Effects of carbohydrate source on physicochemical properties of the exopolysaccharide produced by Lactobacillus fermentum TDS030603 in a chemically defined medium. Carbohydr Polym 79:1040–1045. doi:10.1016/j.carbpol.2009.10.037. - DOI
1. Dan T, Fukuda K, Sugai-Bannai M, Takakuwa N, Motoshima H, Urashima T. 2009. Characterization and expression analysis of the exopolysaccharide gene cluster in Lactobacillus fermentum TDS030603. Biosci Biotechnol Biochem 73:2656–2664. doi:10.1271/bbb.90502. - DOI - PubMed

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[1] Ruas-Madiedo P, de los Reyes-Gavilán CG. 2005. Invited review: methods for the screening, isolation, and characterization of exopolysaccharides produced by lactic acid bacteria. J Dairy Sci 88:843–856. doi:10.3168/jds.S0022-0302(05)72750-8. - DOI - PubMed

[2] Ruas-Madiedo P, de los Reyes-Gavilán CG. 2005. Invited review: methods for the screening, isolation, and characterization of exopolysaccharides produced by lactic acid bacteria. J Dairy Sci 88:843–856. doi:10.3168/jds.S0022-0302(05)72750-8. - DOI - PubMed

[3] Leo F, Hashida S, Kumagai D, Uchida K, Motoshima H, Arai I, Asakuma S, Fukuda K, Urashima T. 2007. Studies on a neutral exopolysaccharide of Lactobacillus fermentum TDS030603. J Appl Glycosci 54:223–229. doi:10.5458/jag.54.223. - DOI

[4] Leo F, Hashida S, Kumagai D, Uchida K, Motoshima H, Arai I, Asakuma S, Fukuda K, Urashima T. 2007. Studies on a neutral exopolysaccharide of Lactobacillus fermentum TDS030603. J Appl Glycosci 54:223–229. doi:10.5458/jag.54.223. - DOI

[5] Gerwig GJ, Dobruchowska JM, Shi T, Urashima T, Fukuda K, Kamerling JP. 2013. Structure determination of the exopolysaccharide of Lactobacillus fermentum TDS030603-a revision. Carbohydr Res 378:84–90. doi:10.1016/j.carres.2013.04.026. - DOI - PubMed

[6] Gerwig GJ, Dobruchowska JM, Shi T, Urashima T, Fukuda K, Kamerling JP. 2013. Structure determination of the exopolysaccharide of Lactobacillus fermentum TDS030603-a revision. Carbohydr Res 378:84–90. doi:10.1016/j.carres.2013.04.026. - DOI - PubMed

[7] Fukuda K, Shi T, Nagami K, Leo F, Nakamura T, Yasuda K, Senda A, Motoshima H, Urashima T. 2010. Effects of carbohydrate source on physicochemical properties of the exopolysaccharide produced by Lactobacillus fermentum TDS030603 in a chemically defined medium. Carbohydr Polym 79:1040–1045. doi:10.1016/j.carbpol.2009.10.037. - DOI

[8] Fukuda K, Shi T, Nagami K, Leo F, Nakamura T, Yasuda K, Senda A, Motoshima H, Urashima T. 2010. Effects of carbohydrate source on physicochemical properties of the exopolysaccharide produced by Lactobacillus fermentum TDS030603 in a chemically defined medium. Carbohydr Polym 79:1040–1045. doi:10.1016/j.carbpol.2009.10.037. - DOI

[9] Dan T, Fukuda K, Sugai-Bannai M, Takakuwa N, Motoshima H, Urashima T. 2009. Characterization and expression analysis of the exopolysaccharide gene cluster in Lactobacillus fermentum TDS030603. Biosci Biotechnol Biochem 73:2656–2664. doi:10.1271/bbb.90502. - DOI - PubMed

[10] Dan T, Fukuda K, Sugai-Bannai M, Takakuwa N, Motoshima H, Urashima T. 2009. Characterization and expression analysis of the exopolysaccharide gene cluster in Lactobacillus fermentum TDS030603. Biosci Biotechnol Biochem 73:2656–2664. doi:10.1271/bbb.90502. - DOI - PubMed

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Complete Genome Sequence of Lactobacillus fermentum MTCC 25067 (Formerly TDS030603), a Viscous Exopolysaccharide-Producing Strain Isolated from Indian Fermented Milk

Affiliations

Complete Genome Sequence of Lactobacillus fermentum MTCC 25067 (Formerly TDS030603), a Viscous Exopolysaccharide-Producing Strain Isolated from Indian Fermented Milk

Authors

Affiliations

Abstract

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References

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Abstract

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