Frequent IDH2 R172 mutations in undifferentiated and poorly-differentiated sinonasal carcinomas

J Pathol. 2017 Aug;242(4):400-408. doi: 10.1002/path.4915. Epub 2017 Jun 9.

Abstract

Sinonasal undifferentiated carcinoma (SNUC) is a high-grade malignancy with limited treatment options and poor outcome. A morphological spectrum of 47 sinonasal tumours including 17 (36.2%) SNUCs was analysed at genomic level. Thirty carcinomas (cohort 1) were subjected to a hybridization exon-capture next-generation sequencing assay (MSK-IMPACTTM ) to interrogate somatic variants in 279 or 410 cancer-related genes. Seventeen sinonasal tumours (cohort 2) were examined only for the presence of IDH1/2 exon 4 mutations by Sanger sequencing. IDH2 R172 single nucleotide variants were overall detected in 14 (82.4%) SNUCs, in two (20%) poorly-differentiated carcinomas with glandular/acinar differentiation, and in one of two high-grade neuroendocrine carcinomas, large cell type (HGNECs). No IDH2 mutation was detected in any of five olfactory neuroblastomas or in any of five SMARCB1-deficient carcinomas. Among 12 IDH2-mutated cases in cohort 1, five (41.7%) harboured co-existing TP53 mutations, four (33.3%) CDKN2A/2B loss-of-function alterations, four (33.3%) MYC amplification, and three (25%) had concurrent SETD2 mutations. AKT1 E17K and KIT D816V hotspot variants were each detected in one IDH2-mutated SNUC. The vast majority of SNUCs and variable proportions of other poorly-differentiated sinonasal carcinomas may be amenable to IDH2-targeted therapy. Copyright © 2017 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Keywords: IDH2 R172; SNUC; sinonasal undifferentiated carcinoma.

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Biomarkers, Tumor / genetics
  • Carcinoma / genetics*
  • Carcinoma / pathology
  • Carcinoma, Neuroendocrine / genetics
  • Carcinoma, Small Cell / genetics
  • DNA Mutational Analysis / methods
  • Female
  • Gene Deletion
  • Genes, p53 / genetics
  • High-Throughput Nucleotide Sequencing / methods
  • Humans
  • Isocitrate Dehydrogenase / genetics*
  • Male
  • Maxillary Sinus Neoplasms / genetics*
  • Maxillary Sinus Neoplasms / pathology
  • Middle Aged
  • Mutation*
  • SMARCB1 Protein / deficiency
  • SMARCB1 Protein / genetics

Substances

  • Biomarkers, Tumor
  • SMARCB1 Protein
  • SMARCB1 protein, human
  • IDH2 protein, human
  • Isocitrate Dehydrogenase

Supplementary concepts

  • Sinonasal undifferentiated carcinoma