Single-Cell Genomics Unravels Brain Cell-Type Complexity

Adv Exp Med Biol. 2017:978:393-407. doi: 10.1007/978-3-319-53889-1_20.

Abstract

The brain is the most complex tissue in terms of cell types that it comprises, to the extent that it is still poorly understood. Single cell genome and transcriptome profiling allow to disentangle the neuronal heterogeneity, enabling the categorization of individual neurons into groups with similar molecular signatures. Herein, we unravel the current state of knowledge in single cell neurogenomics. We describe the molecular understanding of the cellular architecture of the mammalian nervous system in health and in disease; from the discovery of unrecognized cell types to the validation of known ones, applying these state-of-the-art technologies.

Keywords: Single cell genomics; cortex; hippocampus; midbrain; neurobiology; neurodegenerative diseases and neuro-oncology; oligodendrocyte; single cell transcriptomics; somatosensory nervous system.

Publication types

  • Review

MeSH terms

  • Animals
  • Brain / cytology*
  • Brain / metabolism
  • Brain Neoplasms / genetics
  • Brain Neoplasms / pathology
  • Disease Models, Animal
  • Gene Expression Regulation / genetics
  • Genomics / methods*
  • Histone Code / genetics
  • Histones / metabolism
  • Humans
  • Mice
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism
  • Neurodegenerative Diseases / genetics
  • Neurodegenerative Diseases / metabolism
  • Neurodegenerative Diseases / pathology
  • Neurogenesis
  • Neurons / classification
  • Neurons / metabolism*
  • Oligodendroglia / metabolism
  • Protein Processing, Post-Translational / genetics
  • Retina / cytology
  • Retina / metabolism
  • Sequence Analysis / methods
  • Single-Cell Analysis* / methods
  • Smell / genetics
  • Transcriptome

Substances

  • Histones
  • Nerve Tissue Proteins