Reaction mechanism of the metallohydrolase CpsB from Streptococcus pneumoniae, a promising target for novel antimicrobial agents

Dalton Trans. 2017 Oct 10;46(39):13194-13201. doi: 10.1039/c7dt01350g.

Abstract

CpsB is a metal ion-dependent hydrolase involved in the biosynthesis of capsular polysaccharides in bacterial organisms. The enzyme has been proposed as a promising target for novel chemotherapeutics to combat antibiotic resistance. The crystal structure of CpsB indicated the presence of as many as three closely spaced metal ions, modelled as Mn2+, in the active site. While the preferred metal ion composition in vivo is obscure Mn2+ and Co2+ have been demonstrated to be most effective in reconstituting activity. Using isothermal titration calorimetry (ITC) we have demonstrated that, in contrast to the crystal structure, only two Mn2+ or Co2+ ions bind to a monomer of CpsB. This observation is in agreement with magnetic circular dichroism (MCD) and electron paramagnetic resonance (EPR) data that indicate the presence of two weakly ferromagnetically coupled Co2+ ions in the active site of catalytically active CpsB. While CpsB is known to be a phosphoesterase we have also been able to demonstrate that this enzyme is efficient in hydrolyzing the β-lactam substrate nitrocefin. Steady-state and stopped-flow kinetics measurements further indicated that phosphoesters and nitrocefin undergo catalysis in a conserved manner with a metal ion-bridging hydroxide acting as a nucleophile. Thus, the combined physicochemical studies demonstrate that CpsB is a novel member of the dinuclear metallohydrolase family.

MeSH terms

  • Anti-Infective Agents / chemistry
  • Anti-Infective Agents / metabolism*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism*
  • Binding Sites
  • Biocatalysis
  • Calorimetry
  • Catalytic Domain
  • Cephalosporins / chemistry
  • Cephalosporins / metabolism
  • Circular Dichroism
  • Cobalt / chemistry
  • Cobalt / metabolism
  • Crystallography, X-Ray
  • Electron Spin Resonance Spectroscopy
  • Hydrolysis
  • Kinetics
  • Manganese / chemistry
  • Manganese / metabolism
  • Protein Tyrosine Phosphatases / chemistry
  • Protein Tyrosine Phosphatases / metabolism*
  • Streptococcus pneumoniae / enzymology*

Substances

  • Anti-Infective Agents
  • Bacterial Proteins
  • Cephalosporins
  • Cobalt
  • Manganese
  • CpsB protein, Streptococcus pneumoniae
  • Protein Tyrosine Phosphatases
  • nitrocefin