Resistance to Ceftazidime-Avibactam Is Due to Transposition of KPC in a Porin-Deficient Strain of Klebsiella pneumoniae with Increased Efflux Activity

Antimicrob Agents Chemother. 2017 Sep 22;61(10):e00989-17. doi: 10.1128/AAC.00989-17. Print 2017 Oct.

Abstract

Ceftazidime-avibactam is an antibiotic with activity against serine beta-lactamases, including Klebsiella pneumoniae carbapenemase (KPC). Recently, reports have emerged of KPC-producing isolates resistant to this antibiotic, including a report of a wild-type KPC-3 producing sequence type 258 Klebsiella pneumoniae that was resistant to ceftazidime-avibactam. We describe a detailed analysis of this isolate, in the context of two other closely related KPC-3 producing isolates, recovered from the same patient. Both isolates encoded a nonfunctional OmpK35, whereas we demonstrate that a novel T333N mutation in OmpK36, present in the ceftazidime-avibactam resistant isolate, reduced the activity of this porin and impacted ceftazidime-avibactam susceptibility. In addition, we demonstrate that the increased expression of blaKPC-3 and blaSHV-12 observed in the ceftazidime-avibactam-resistant isolate was due to transposition of the Tn4401 transposon harboring blaKPC-3 into a second plasmid, pIncX3, which also harbored blaSHV-12, ultimately resulting in a higher copy number of blaKPC-3 in the resistant isolate. pIncX3 plasmid from the ceftazidime-avibactam resistant isolate, conjugated into a OmpK35/36-deficient K. pneumoniae background that harbored a mutation to the ramR regulator of the acrAB efflux operon recreated the ceftazidime-avibactam-resistant MIC of 32 μg/ml, confirming that this constellation of mutations is responsible for the resistance phenotype.

Keywords: KPC; Klebsiella pneumoniae; ceftazidime-avibactam; porin mutation; resistance.

MeSH terms

  • Azabicyclo Compounds / therapeutic use*
  • Bacterial Proteins / biosynthesis*
  • Bacterial Proteins / genetics*
  • Carrier Proteins / genetics
  • Ceftazidime / therapeutic use*
  • DNA Transposable Elements / genetics
  • Drug Combinations
  • Drug Resistance, Multiple, Bacterial / genetics
  • Humans
  • Klebsiella pneumoniae / drug effects*
  • Klebsiella pneumoniae / genetics*
  • Klebsiella pneumoniae / isolation & purification
  • Microbial Sensitivity Tests
  • Plasmids / genetics
  • Porins / genetics*
  • Trans-Activators / genetics
  • beta-Lactamases / biosynthesis*
  • beta-Lactamases / genetics*

Substances

  • Azabicyclo Compounds
  • Bacterial Proteins
  • Carrier Proteins
  • DNA Transposable Elements
  • Drug Combinations
  • OmpK35 porin, Klebsiella pneumoniae
  • OmpK36 protein, Klebsiella pneumoniae
  • Porins
  • Trans-Activators
  • avibactam, ceftazidime drug combination
  • Ceftazidime
  • beta-lactamase SHV-12
  • beta-Lactamases
  • beta-lactamase KPC-3, Klebsiella pneumoniae
  • carbapenemase