From transcriptional complexity to cellular phenotypes: Lessons from yeast

Yeast. 2017 Dec;34(12):475-482. doi: 10.1002/yea.3277. Epub 2017 Oct 11.

Abstract

Pervasive transcription has been reported in many eukaryotic organisms, revealing a highly interleaved transcriptome organization that involves thousands of coding and non-coding RNAs. However, to date, the biological impact of transcriptome complexity is still poorly understood. Here I will review how subtle variations of the transcriptome can lead to divergent cellular phenotypes by fine-tuning both its coding potential and regulation. I will discuss strategies that can be used to link molecular variations with divergent biological outcomes. Finally, I will explore the implication of transcriptional complexity for our understanding of gene expression in the context of cell-to-cell phenotypic variability. Copyright © 2017 John Wiley & Sons, Ltd.

Keywords: S. cerevisiae; Transcription start site; alternative polyadenylation; mRNA isoforms; transcriptome.

Publication types

  • Review

MeSH terms

  • Gene Expression Regulation, Fungal
  • Genetic Variation
  • Phenotype
  • Proteome / genetics
  • RNA, Fungal / chemistry
  • RNA, Fungal / genetics
  • Saccharomyces cerevisiae / classification*
  • Saccharomyces cerevisiae / cytology
  • Saccharomyces cerevisiae / genetics
  • Transcription, Genetic
  • Transcriptome / physiology*

Substances

  • Proteome
  • RNA, Fungal