ALIGNSEC: viewing protein secondary structure predictions within large multiple sequence alignments

Bioinformatics. 2017 Dec 15;33(24):3991-3992. doi: 10.1093/bioinformatics/btx521.

Abstract

Motivation: ALIGNSEC is a module within ANTHEPROT designed for the interactive display, edition and printing of large-scale multiple alignments integrating secondary structure predictions.

Availability and implementation: The ALIGNSEC module is part of the ANTHEPROT package (http://antheprot-pbil.ibcp.fr) which can be used freely for academic users. It is running on Windows Operating systems. For commercial use, please contact the author.

Contact: gilbert.deleage@ibcp.fr.

MeSH terms

  • Computer Simulation
  • Protein Structure, Secondary*
  • Sequence Alignment / methods*
  • Software*