Methotrexate analogues. 34. Replacement of the glutamate moiety in methotrexate and aminopterin by long-chain 2-aminoalkanedioic acids

J Med Chem. 1988 Jul;31(7):1338-44. doi: 10.1021/jm00402a014.


Eight previously unreported methotrexate (MTX) and aminopterin (AMT) analogues with the L-glutamate moiety replaced by DL-2-aminoalkanedioic acids containing up to 10 CH2 groups were synthesized from 4-amino-4-deoxy-N10-methylpteroic or 4-amino-4-deoxy-N10-formylpteroic acid. All the compounds were potent inhibitors of purified L1210 mouse leukemia dihydrofolate reductase (DHFR), with IC50's of 0.023-0.034 microM for the MTX analogues and 0.054-0.067 microM for the AMT analogues. The compounds were not substrates for, but were inhibitors of, partially purified mouse liver folylpolyglutamate synthetase (FPGS). Activity was correlated with the number of CH2 groups in the side chain. The IC50's for inhibition of cell growth in culture by the chain-extended MTX analogues were 0.016-0.64 microM against CEM human leukemic lymphoblasts and 0.0012-0.026 microM against L1210 mouse leukemia cells. However, the optimal chain length for growth-inhibitory activity was species-dependent. Our results suggested that CEM cells were inhibited most actively by the analogue with nine CH2 groups, while L1210 cells were most sensitive to the analogue with six CH2 groups. Among the AMT analogues, on the other hand, the most active compound against L1210 cells was the one with nine CH2 groups, which had an IC50 of 0.000 65 microM as compared with 0.0046 microM for MTX and 0.002 microM for AMT. A high degree of cross-resistance was observed between MTX and the chain-extended compounds in two MTX-resistant cell lines, CEM/MTX and L1210/R81. All the MTX analogues were active against L1210 leukemia in mice on a qd X 9 schedule, with optimal increases in lifespan (ILS) of 75-140%. Notwithstanding their high in vitro activity, the AMT analogues were more toxic and less therapeutically effective than MTX analogues of the same chain length even though neither series of compounds possessed FPGS substrate activity. These MTX and AMT analogues are an unusual group of compounds in that they retain the dicarboxylic acid structure of classical antifolates yet are more lipophilic than the parent compounds because they have more CH2 groups and are almost equivalent in vivo to MTX on the same schedule even though they do not form polyglutamates.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acids, Dicarboxylic / chemical synthesis*
  • Amino Acids, Dicarboxylic / pharmacology
  • Aminopterin / analogs & derivatives*
  • Aminopterin / pharmacology
  • Aminopterin / therapeutic use
  • Animals
  • Cell Division / drug effects
  • Chemical Phenomena
  • Chemistry
  • Drug Resistance
  • Folic Acid Antagonists
  • Glutamates*
  • Glutamic Acid
  • Humans
  • Leukemia L1210 / drug therapy
  • Leukemia L1210 / enzymology
  • Leukemia L1210 / pathology
  • Liver / enzymology
  • Methotrexate / analogs & derivatives*
  • Methotrexate / pharmacology
  • Methotrexate / therapeutic use
  • Mice
  • Peptide Synthases / antagonists & inhibitors
  • Structure-Activity Relationship
  • Tumor Cells, Cultured / pathology


  • Amino Acids, Dicarboxylic
  • Folic Acid Antagonists
  • Glutamates
  • Glutamic Acid
  • Peptide Synthases
  • folylpolyglutamate synthetase
  • Aminopterin
  • Methotrexate