Prolyl dihydroxylation of unassembled uS12/Rps23 regulates fungal hypoxic adaptation

Elife. 2017 Oct 30;6:e28563. doi: 10.7554/eLife.28563.

Abstract

The prolyl-3,4-dihydroxylase Ofd1 and nuclear import adaptor Nro1 regulate the hypoxic response in fission yeast by controlling activity of the sterol regulatory element-binding protein transcription factor Sre1. Here, we identify an extra-ribosomal function for uS12/Rps23 central to this regulatory system. Nro1 binds Rps23, and Ofd1 dihydroxylates Rps23 P62 in complex with Nro1. Concurrently, Nro1 imports Rps23 into the nucleus for assembly into 40S ribosomes. Low oxygen inhibits Ofd1 hydroxylase activity and stabilizes the Ofd1-Rps23-Nro1 complex, thereby sequestering Ofd1 from binding Sre1, which is then free to activate hypoxic gene expression. In vitro studies demonstrate that Ofd1 directly binds Rps23, Nro1, and Sre1 through a consensus binding sequence. Interestingly, Rps23 expression modulates Sre1 activity by changing the Rps23 substrate pool available to Ofd1. To date, oxygen is the only known signal to Sre1, but additional nutrient signals may tune the hypoxic response through control of unassembled Rps23 or Ofd1 activity.

Keywords: S. pombe; SREBP; cell biology; extra-ribosomal; nuclear import; prolyl hydroxylation; ribosome; uS12.

MeSH terms

  • Adaptation, Physiological*
  • Gene Expression Regulation, Fungal*
  • Hydroxylation
  • Hypoxia*
  • Proline / metabolism*
  • Protein Binding
  • Protein Interaction Mapping
  • Schizosaccharomyces / genetics
  • Schizosaccharomyces / metabolism
  • Schizosaccharomyces / physiology*
  • Schizosaccharomyces pombe Proteins / metabolism*

Substances

  • Schizosaccharomyces pombe Proteins
  • Proline