Genome-based analysis of virulence determinants of a Serratia marcescens strain from soft tissues following a snake bite

Future Microbiol. 2018 Mar:13:331-343. doi: 10.2217/fmb-2017-0202. Epub 2017 Nov 6.

Abstract

Aim: Serratia marcescens wound infection after snakebite is often associated with aggressive presentations. However, the virulence determinants remain understudied.

Materials & methods: Whole-genome sequencing was performed on S. marcescens VGH107, an isolate from wound infection secondary to Trimeresurus mucrosquamatus bite. Comparative genomics approach coupled with multivirulent-locus sequencing typing was applied to systematically predict potential virulence factors.

Results: Multivirulent-locus sequencing typing indicated VGH107 falls within the cluster of high pathogenic strains. Comparative analysis identified virulence genes unique in VGH107, including ecpD and ecpE genes for periplasmic chaperone-pilus subunit complex and cdiA and cdiB genes for contact-dependent growth inhibition system.

Conclusion: The data established here provide foundation for further research regarding the virulence and resistance of S. marcescens.

Keywords: Serratia marcescens; Taiwan; colistin resistance; next-generation sequencing; snake bite; virulence; whole-genome sequencing; wound infection.

Publication types

  • Case Reports
  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA, Bacterial / genetics
  • Drug Resistance, Multiple, Bacterial / genetics
  • Genes, Bacterial
  • Genome, Bacterial / genetics*
  • Humans
  • Male
  • Middle Aged
  • Multilocus Sequence Typing
  • Phylogeny
  • Sequence Analysis, DNA
  • Serratia Infections / etiology
  • Serratia Infections / microbiology*
  • Serratia marcescens / genetics*
  • Serratia marcescens / pathogenicity*
  • Snake Bites / complications
  • Snake Bites / microbiology*
  • Taiwan
  • Trimeresurus / microbiology*
  • Virulence Factors / genetics
  • Wound Infection / etiology
  • Wound Infection / microbiology*

Substances

  • DNA, Bacterial
  • Virulence Factors