Identification of the AQP members involved in abiotic stress responses from Arabidopsis

Gene. 2018 Mar 10:646:64-73. doi: 10.1016/j.gene.2017.12.048. Epub 2017 Dec 24.

Abstract

Aquaporins (AQPs) constitute a highly diverse family of water channel proteins that play crucial biological functions in plant growth and development and stress physiology. In Arabidopsis, 35 AQPs are classified into four subfamilies (PIPs, TIPs, NIPs and SIPs). However, knowledge about the roles of different subfamily AQPs remains limited. Here, we explored the chromosomal location, gene structure and expression patterns of all AQPs in different tissues or under different abiotic stresses based on available microarray data. Tissue expression analysis showed that different AQPs had various expression patterns in tissues (root, leaf, flower and seed). Expression profiles under stress conditions revealed that most AQPs were responsive to osmotic, salt and drought stresses. Phenotypic and physiological identification showed that Tip2;2 loss-of-function mutant exhibited less sensitive to abiotic stresses (mannitol, NaCl and PEG) compared with wild-type, as evident by analysis of germination rate, root growth, survival rate, ion leakage, malondialdehyde (MDA) and proline contents. Mutant of TIP2;2 modulated the transcript levels of SOS1, SOS2, SOS3, DREB1A, DREB2A and P5CS1, under abiotic stress conditions. This study provides a basis for further functional identification of stress-related candidate AQPs in Arabidopsis.

Keywords: Abiotic stresses; Aquaporin; Arabidopsis; Functional identification; Physiological trait; TIP2;2; Tissular expression.

MeSH terms

  • Aquaporins / genetics*
  • Aquaporins / metabolism*
  • Arabidopsis / genetics
  • Arabidopsis / growth & development*
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Chromosome Mapping
  • Droughts
  • Flowers / genetics
  • Flowers / growth & development
  • Flowers / metabolism
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Multigene Family
  • Oligonucleotide Array Sequence Analysis
  • Plant Leaves / genetics
  • Plant Leaves / growth & development
  • Plant Leaves / metabolism
  • Plant Roots / genetics
  • Plant Roots / growth & development
  • Plant Roots / metabolism
  • Seeds / genetics
  • Seeds / growth & development
  • Seeds / metabolism
  • Stress, Physiological*
  • Tissue Distribution

Substances

  • Aquaporins
  • Arabidopsis Proteins