High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping

Max R Schroeder; Phalasy Juieng; Dhwani Batra; Kristen Knipe; Lori A Rowe; Mili Sheth; Peyton Smith; Lisley Garcia-Toledo; Vladimir N Loparev; Rebecca L Lindsey

doi:10.1128/genomeA.01384-17

High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping

Genome Announc. 2018 Jan 4;6(1):e01384-17. doi: 10.1128/genomeA.01384-17.

Authors

Max R Schroeder^{1

2}, Phalasy Juieng¹, Dhwani Batra¹, Kristen Knipe¹, Lori A Rowe¹, Mili Sheth¹, Peyton Smith^{2

3}, Lisley Garcia-Toledo^{2

3}, Vladimir N Loparev¹, Rebecca L Lindsey⁴

Affiliations

¹ Biotechnology Core Facility Branch, Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
² Oak Ridge Institute for Science and Education, Oak Ridge, Tennessee, USA.
³ Enteric Diseases Laboratory Branch, Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
⁴ Enteric Diseases Laboratory Branch, Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA Rebecca.Lindsey@cdc.hhs.gov.

Abstract

Escherichia spp., including E. albertii and E. coli, Shigella dysenteriae, and S. flexneri are causative agents of foodborne disease. We report here reference-level whole-genome sequences of E. albertii (2014C-4356), E. coli (2011C-4315 and 2012C-4431), S. dysenteriae (BU53M1), and S. flexneri (94-3007 and 71-2783).