Characterization of a long-chain α-galactosidase from Papiliotrema flavescens

World J Microbiol Biotechnol. 2018 Jan 4;34(2):19. doi: 10.1007/s11274-017-2403-6.

Abstract

α-Galactosidases are assigned to the class of hydrolases and the subclass of glycoside hydrolases (GHs). They belong to six GH families and include the only characterized α-galactosidases from yeasts (GH 27, Saccharomyces cerevisiae). The present study focuses on an investigation of the lactose-inducible α-galactosidase produced by Papiliotrema flavescens. The enzyme was present on the surface of cells and in the cytosol. Its temperature optimum was about 60 °C and the pH optimum was 4.8; the pH stability ranged from 3.2 to 6.6. This α-galactosidase also exhibited transglycosylation activity. The cytosol α-galactosidase with a molecular weight about 110 kDa, was purified using a combination of liquid chromatography techniques. Three intramolecular peptides were determined by the partial structural analysis of the sequences of the protein isolated, using MALDI-TOF/TOF mass spectrometry. The data obtained recognized the first yeast α-galactosidase, which belongs to the GH 36 family. The bioinformatics analysis and homology modeling of a 210 amino acids long C-terminal sequence (derived from cDNA) confirmed the correctness of these findings. The study was also supplemented by the screening of capsular cryptococcal yeasts, which produce the surface lactose-inducible α- and β-galactosidases. The production of the lactose-inducible α-galactosidases was not found to be a general feature within the yeast strains examined and, therefore, the existing hypothesis on the general function of this enzyme in cryptococcal capsule rearrangement cannot be confirmed.

Keywords: Cryptococcus flavescens; GH 36 family; Lactose-inducible; Long-chain; Papiliotrema flavescens; α-Galactosidase.

MeSH terms

  • Amino Acid Sequence
  • Basidiomycota / classification
  • Basidiomycota / enzymology*
  • Basidiomycota / genetics
  • Basidiomycota / growth & development
  • Cryptococcus
  • Cytosol / enzymology
  • DNA, Complementary
  • DNA, Fungal / genetics
  • Enzyme Stability
  • Fungal Proteins / chemistry*
  • Fungal Proteins / genetics
  • Fungal Proteins / isolation & purification
  • Fungal Proteins / metabolism*
  • Genes, Fungal / genetics
  • Glycoside Hydrolases / metabolism
  • Hydrogen-Ion Concentration
  • Lactose / metabolism
  • Models, Molecular
  • Molecular Weight
  • Protein Conformation
  • Sequence Alignment
  • Sequence Analysis, Protein
  • Substrate Specificity
  • Temperature
  • alpha-Galactosidase / chemistry*
  • alpha-Galactosidase / genetics
  • alpha-Galactosidase / isolation & purification
  • alpha-Galactosidase / metabolism*

Substances

  • DNA, Complementary
  • DNA, Fungal
  • Fungal Proteins
  • Glycoside Hydrolases
  • alpha-Galactosidase
  • Lactose