The signature of liver cancer in immune cells DNA methylation

Clin Epigenetics. 2018 Jan 18:10:8. doi: 10.1186/s13148-017-0436-1. eCollection 2018.

Abstract

Background: The idea that changes to the host immune system are critical for cancer progression was proposed a century ago and recently regained experimental support.

Results: Herein, the hypothesis that hepatocellular carcinoma (HCC) leaves a molecular signature in the host peripheral immune system was tested by profiling DNA methylation in peripheral blood mononuclear cells (PBMC) and T cells from a discovery cohort (n = 69) of healthy controls, chronic hepatitis, and HCC using Illumina 450K platform and was validated in two validation sets (n = 80 and n = 48) using pyrosequencing.

Conclusions: The study reveals a broad signature of hepatocellular carcinoma in PBMC and T cells DNA methylation which discriminates early HCC stage from chronic hepatitis B and C and healthy controls, intensifies with progression of HCC, and is highly enriched in immune function-related genes such as PD-1, a current cancer immunotherapy target. These data also support the feasibility of using these profiles for early detection of HCC.

Keywords: DNA methylation; Hepatocellular carcinoma; Immune functions; Peripheral white blood cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Carcinoma, Hepatocellular / diagnosis
  • Carcinoma, Hepatocellular / genetics*
  • Carcinoma, Hepatocellular / immunology
  • Case-Control Studies
  • DNA Methylation*
  • Disease Progression
  • Early Detection of Cancer
  • Epigenomics / methods*
  • Female
  • Hepatitis, Chronic / genetics*
  • Hepatitis, Chronic / immunology
  • Humans
  • Leukocytes, Mononuclear / chemistry
  • Liver Neoplasms / diagnosis
  • Liver Neoplasms / genetics*
  • Liver Neoplasms / immunology
  • Male
  • Middle Aged
  • Neoplasm Staging
  • Programmed Cell Death 1 Receptor / genetics
  • Sequence Analysis, DNA
  • T-Lymphocytes / chemistry

Substances

  • PDCD1 protein, human
  • Programmed Cell Death 1 Receptor

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