Flavobacterium kingsejongi sp. nov., a carotenoid-producing species isolated from Antarctic penguin faeces

Int J Syst Evol Microbiol. 2018 Mar;68(3):911-916. doi: 10.1099/ijsem.0.002610. Epub 2018 Feb 2.

Abstract

Taxonomic studies were carried out on a carotenoid-producing strain, designated WV39T, isolated from the faeces of Antarctic penguins. Cells of strain WV39T were Gram-stain-negative, strictly aerobic, yellow and rod-shaped. 16S rRNA gene sequence analysis revealed that strain WV39T was closely related to Flavobacterium qiangtangense JCM 19739T (96.3 % similarity), Flavobacterium noncentrifugens NBRC 108844T (95.5 %) and Flavobacterium aquatile LMG 4008T (94.9 %). The predominant cellular fatty acids were iso-C15 : 0, iso-C15 : 0 3-OH and summed feature 3 (comprising iso-C15 : 0 2-OH and/or C16 : 1ω7c). Menaquinone-6 was the sole quinone identified, and the major pigment was zeaxanthin. The major polar lipid was phosphatidylethanolamine. DNA-DNA relatedness of strain WV39T with respect to its closest phylogenetic neighbours was 41.8 % for F. qiangtangense JCM 19739T, 25.5 % for F. aquatile LMG 4008T and 25.2 % for F. noncentrifugens NBRC 108844T. The DNA G+C content of strain WV39T was 39.8 mol%. Based on the phenotypic, chemotaxonomic and phylogenetic data, strain WV39T is concluded to represent a novel species of the genus Flavobacterium, for which the name Flavobacteriumkingsejongi sp. nov. is proposed. The type strain is WV39T (=KCTC 42908T=CECT 9085T).

Keywords: Antarctica; Flavobacterium; carotenoid; penguin stool.

MeSH terms

  • Animals
  • Antarctic Regions
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Feces / microbiology
  • Flavobacterium / classification*
  • Flavobacterium / genetics
  • Flavobacterium / isolation & purification
  • Nucleic Acid Hybridization
  • Phosphatidylethanolamines / chemistry
  • Phylogeny*
  • Pigmentation
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Spheniscidae / microbiology*
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry
  • Zeaxanthins / chemistry*

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phosphatidylethanolamines
  • RNA, Ribosomal, 16S
  • Zeaxanthins
  • Vitamin K 2
  • phosphatidylethanolamine
  • menaquinone 6