Using Metagenomics to Characterize an Expanding Virosphere
- PMID: 29522738
- DOI: 10.1016/j.cell.2018.02.043
Using Metagenomics to Characterize an Expanding Virosphere
Abstract
We know less about viruses than any other lifeform. Fortunately, metagenomics has led to a massive expansion in the known diversity of the virosphere. Here, we discuss how metagenomics has changed our understanding of RNA viruses and present some of the remaining challenges, including characterization of the "dark matter" of divergent viral genomes.
Copyright © 2018 Elsevier Inc. All rights reserved.
Similar articles
-
Expanding the RNA Virosphere by Unbiased Metagenomics.Annu Rev Virol. 2019 Sep 29;6(1):119-139. doi: 10.1146/annurev-virology-092818-015851. Epub 2019 May 17. Annu Rev Virol. 2019. PMID: 31100994 Review.
-
Metagenomics reshapes the concepts of RNA virus evolution by revealing extensive horizontal virus transfer.Virus Res. 2018 Jan 15;244:36-52. doi: 10.1016/j.virusres.2017.10.020. Epub 2017 Nov 8. Virus Res. 2018. PMID: 29103997 Free PMC article. Review.
-
Expansion of the metazoan virosphere: progress, pitfalls, and prospects.Curr Opin Virol. 2018 Aug;31:17-23. doi: 10.1016/j.coviro.2018.08.008. Epub 2018 Sep 17. Curr Opin Virol. 2018. PMID: 30237139 Review.
-
Meta-transcriptomics and the evolutionary biology of RNA viruses.Virus Res. 2018 Jan 2;243:83-90. doi: 10.1016/j.virusres.2017.10.016. Epub 2017 Oct 27. Virus Res. 2018. PMID: 29111455 Free PMC article. Review.
-
Metagenomic Insights into the Sewage RNA Virosphere of a Large City.Viruses. 2020 Sep 21;12(9):1050. doi: 10.3390/v12091050. Viruses. 2020. PMID: 32967111 Free PMC article.
Cited by
-
Editing Metabolism, Sex, and Microbiome: How Can We Help Poplar Resist Pathogens?Int J Mol Sci. 2024 Jan 21;25(2):1308. doi: 10.3390/ijms25021308. Int J Mol Sci. 2024. PMID: 38279306 Free PMC article. Review.
-
RNA virus diversity in rodents.Arch Microbiol. 2023 Dec 1;206(1):9. doi: 10.1007/s00203-023-03732-4. Arch Microbiol. 2023. PMID: 38038743 Review.
-
Genetic diversity of RNA viruses infecting invertebrate pests of rice.Sci China Life Sci. 2024 Jan;67(1):175-187. doi: 10.1007/s11427-023-2398-y. Epub 2023 Nov 7. Sci China Life Sci. 2024. PMID: 37946067
-
RNA virus diversity in three parasitoid wasps of tephritid flies: insights from novel and known species.Microbiol Spectr. 2023 Dec 12;11(6):e0313923. doi: 10.1128/spectrum.03139-23. Epub 2023 Nov 6. Microbiol Spectr. 2023. PMID: 37930041 Free PMC article.
-
Diversity and connectedness of brine shrimp viruses in global hypersaline ecosystems.Sci China Life Sci. 2024 Jan;67(1):188-203. doi: 10.1007/s11427-022-2366-8. Epub 2023 Oct 30. Sci China Life Sci. 2024. PMID: 37922067
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources
Other Literature Sources
