Calcium Sensing by Recoverin: Effect of Protein Conformation on Ion Affinity

J Phys Chem Lett. 2018 Apr 5;9(7):1613-1619. doi: 10.1021/acs.jpclett.8b00495. Epub 2018 Mar 15.

Abstract

The detailed functional mechanism of recoverin, which acts as a myristoyl switch at the rod outer-segment disk membrane, is elucidated by direct and replica-exchange molecular dynamics. In accord with NMR structural evidence and calcium binding assays, simulations point to the key role of enhanced calcium binding to the EF3 loop of the semiopen state of recoverin as compared to the closed state. This 2-4-order decrease in calcium dissociation constant stabilizes the semiopen state in response to the increase of cytosolic calcium concentration in the vicinity of recoverin. A second calcium ion then binds to the EF2 loop and, consequently, the structure of the protein changes from the semiopen to the open state. The latter has the myristoyl chain extruded to the cytosol, ready to act as a membrane anchor of recoverin.

MeSH terms

  • Animals
  • Calcium / chemistry
  • Calcium / metabolism*
  • Cattle
  • Coordination Complexes / chemistry
  • Coordination Complexes / metabolism*
  • EF Hand Motifs
  • Magnetic Resonance Spectroscopy
  • Molecular Dynamics Simulation
  • Mutation
  • Phase Transition
  • Protein Binding
  • Protein Conformation
  • Recoverin / chemistry
  • Recoverin / genetics
  • Recoverin / metabolism*
  • Thermodynamics

Substances

  • Coordination Complexes
  • Recoverin
  • Calcium