Phosphoproteomic profiling reveals ABA-responsive phosphosignaling pathways in Physcomitrella patens

Plant J. 2018 May;94(4):699-708. doi: 10.1111/tpj.13891. Epub 2018 Apr 23.

Abstract

Abscisic acid (ABA) and its signaling system are important for land plants to survive in terrestrial conditions. Here, we took a phosphoproteomic approach to elucidate the ABA signaling network in Physcomitrella patens, a model species of basal land plants. Our phosphoproteomic analysis detected 4630 phosphopeptides from wild-type P. patens and two ABA-responsive mutants, a disruptant of group-A type-2C protein phosphatase (PP2C; ppabi1a/b) and AR7, a defective mutant in ARK, identified as an upstream regulator of SnRK2. Quantitative analysis detected 143 ABA-responsive phosphopeptides in P. patens. The analysis indicated that SnRK2-mediated phosphorylation and target motifs were partially conserved in bryophytes. Our data demonstrate that the PpSnRK2B and AREB/ABF-type transcription factors are phosphorylated in vivo in response to ABA under the control of ARK. On the other hand, our data also revealed the following: (i) the entire ABA-responsive phosphoproteome in P. patens is quite diverse; (ii) P. patens PP2C affects additional pathways other than the known ABA signaling pathway; and (iii) ARK is mainly involved in ABA signaling. Taken together, we propose that the core ABA signaling pathway is essential in all land plants; however, some ABA-responsive phosphosignaling uniquely developed in bryophytes during the evolutionary process.

Keywords: Physcomitrella patens; abscisic acid; phosphoproteomics; protein kinase; protein phosphatase; protein phosphorylation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Abscisic Acid / metabolism*
  • Amino Acid Motifs
  • Bryopsida / genetics
  • Bryopsida / physiology*
  • Mutation
  • Phosphorylation
  • Plant Growth Regulators / metabolism*
  • Plant Proteins / metabolism*
  • Protein Phosphatase 2C / genetics
  • Protein Phosphatase 2C / metabolism
  • Protein Serine-Threonine Kinases
  • Proteome*
  • Proteomics
  • Signal Transduction*

Substances

  • Plant Growth Regulators
  • Plant Proteins
  • Proteome
  • Abscisic Acid
  • Protein Serine-Threonine Kinases
  • Protein Phosphatase 2C