Tepidibaculum saccharolyticum gen. nov., sp. nov. a moderately thermophilic, anaerobic, spore-forming bacterium isolated from a terrestrial hot spring

Extremophiles. 2018 Sep;22(5):761-768. doi: 10.1007/s00792-018-1036-5. Epub 2018 Jun 18.

Abstract

A novel moderately thermophilic, anaerobic bacterium, strain STR9T was isolated from terrestrial hot spring at Uzon Caldera, Kamchatka peninsula, Russia. Cells of strain STR9T were spore-forming motile straight or slightly curved rods 0.3 μm in diameter and 1.0-2.0 μm in length having a Gram-positive cell-wall structure. The temperature range for growth was 30-58 °C, with an optimum at 50 °C. The pH range for growth was 5.0-10.5, with an optimum at pH 8.0-9.0. NaCl inhibited growth of the strain STR9T and no growth was evident above 0.5% NaCl (w/v). Several mono-, di-, and polysaccharides as well as beef extract and yeast extract supported growth. The main end products of glucose fermentation were ethanol, acetate, hydrogen, and carbon dioxide. The G + C content of DNA of strain STR9T was 40.0 mol% (Tm). Analysis of the 16S rRNA gene sequences revealed that strain STR9T belongs to the family Ruminococcaceae, class Clostridia, with less than 93% 16S rRNA gene sequence similarity to any species with validly published name. We propose to assign strain STR9T to a new species of a novel genus Tepidibaculum saccharolyticum gen. nov., sp. nov. The type strain is STR9T (= DSM 28577T = VKM B-2882T = UNIQEM STR9T).

Keywords: Anaerobe; Clostridiales; Fermentative bacteria; Firmicutes; Thermophilic.

MeSH terms

  • Anaerobiosis
  • Bacterial Typing Techniques / methods
  • Clostridiales* / genetics
  • Clostridiales* / isolation & purification
  • Clostridiales* / metabolism
  • DNA, Bacterial / analysis
  • Fermentation / physiology
  • Genes, rRNA
  • Hot Springs / microbiology*
  • Hot Temperature
  • Phylogeny
  • Sequence Analysis, RNA / methods

Substances

  • DNA, Bacterial