The Identification of Allergen-Derived T Cell Epitopes

Methods Mol Biol. 2018:1799:153-163. doi: 10.1007/978-1-4939-7896-0_13.

Abstract

Type I allergy is a disease primarily mediated by immunoglobulin E (IgE) and T helper type 2 (Th2) cells. The role of Th2 and other T cell subsets in the pathology of allergic disease as well as induction of tolerance has become an area of intense research over the last decades. Studying allergen-specific T cells to gain a better understanding of their contribution to allergic pathology and how they are modulated by allergen-specific immunotherapy requires knowledge of the allergens targeted by these cells. Identification of T cell epitopes in allergy can be achieved by a variety of methods. In this chapter, we will focus on a technique named FluoroSpot, which relies on the detection of cytokines secreted by T cells in response to stimulation with an antigen (allergen), such as timothy grass (TG) extract or an allergen-derived peptide, for which the cell is specific. We will describe how to overcome the challenge of detecting rare, TG-specific, T cells that occur at low frequency in the blood by using an in vitro expansion culture and subsequent mapping of the precise T cell epitope using FluoroSpot.

Keywords: Allergy; Cytokine; FluoroSpot; T cell epitope; T helper 2 cells; Timothy grass.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Allergens / chemistry
  • Allergens / immunology*
  • Amino Acid Sequence
  • Cells, Cultured
  • Cytokines / metabolism
  • Data Analysis
  • Epitope Mapping* / methods
  • Epitopes, T-Lymphocyte / chemistry
  • Epitopes, T-Lymphocyte / immunology*
  • Humans
  • Lymphocyte Activation
  • T-Lymphocyte Subsets / immunology
  • T-Lymphocyte Subsets / metabolism
  • Th2 Cells / immunology
  • Th2 Cells / metabolism

Substances

  • Allergens
  • Cytokines
  • Epitopes, T-Lymphocyte